DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and Lyl1

DIOPT Version :10

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001007678.1 Gene:Lyl1 / 304663 RGDID:1359244 Length:278 Species:Rattus norvegicus


Alignment Length:257 Identity:61/257 - (23%)
Similarity:83/257 - (32%) Gaps:94/257 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 CNNMAQNQQYGMIMEQSVVSTAPAIPVASPPAVEVMGSSNVGTCKTIPASAGPKPKRSYTKKN-- 160
            |...|| .:.|..|.:.......:.|..:||:.              |||.||.|......:|  
  Rat     2 CPPQAQ-AEVGSAMTEKTEMVCTSSPAPAPPSK--------------PASPGPLPAEEVDHRNTC 51

  Fly   161 --------------QPSTTATSTPT----------------AAAESSASVNLYTEEFQN------ 189
                          ....|..:.||                ..|..:.:::.:...|.|      
  Rat    52 NPWLPPGVPVINLGHTRPTGAAMPTTELSAFRPSLLQLAALGTAPPTLALHYHPHPFLNSVYIGP 116

  Fly   190 ---FD-FDNSALFDDSVEDDEDLMLFSGGEDFDGNDGSFDLADGENQDAAAGGSGKKRRGKQITP 250
               |. |.||.|                  ....:.|..||.||......|              
  Rat   117 AGPFSIFPNSRL------------------KRRPSHGELDLVDGHQPQKVA-------------- 149

  Fly   251 VVKRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISALGDLLR 312
                 ||:..|:|||.|.|::|.||..||:.||....||:|||:|.|::|..||..|..|||
  Rat   150 -----RRVFTNSRERWRQQHVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLR 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 bHLH_TS_amos_like 250..311 CDD:381558 26/60 (43%)
Lyl1NP_001007678.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 15/64 (23%)
bHLH_TS_LYL1 145..209 CDD:381548 30/81 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..278
Blue background indicates that the domain is not in the aligned region.

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