DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and hlh-10

DIOPT Version :10

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_505401.2 Gene:hlh-10 / 191402 WormBaseID:WBGene00001954 Length:202 Species:Caenorhabditis elegans


Alignment Length:246 Identity:62/246 - (25%)
Similarity:102/246 - (41%) Gaps:78/246 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SSSPASHRSESPEYVDLNTMYNGGCNNMAQNQQY-------GMIMEQSVVSTAPAIPVASPPAVE 131
            |||..:|:.|.   :||:| .|.|.:.::..||.       ||.::|::.:.          .::
 Worm     3 SSSMTTHQEEP---LDLST-GNHGNSELSDEQQIMQVMESCGMFLQQNLFAW----------FLQ 53

  Fly   132 VMGSSNVGTCKTIPASAGPKPKRSYTKKNQPSTTATSTPTAAAESSASVNLYTEEFQNFDFDNSA 196
            .|          :.|||           :||..|....|.                         
 Worm    54 SM----------LEASA-----------SQPQLTQDEPPE------------------------- 72

  Fly   197 LFDDSVEDDEDLMLFSGGEDFDGNDGSFDLADGENQDAAAGGSGKKRRGKQITPVVKRKRRLAAN 261
              :|:.|:  ||:..:..|..|.|:.:........:..:.|...::..||..|      ||..||
 Worm    73 --NDTKEN--DLVKQNKSEVNDENESTPSPTQNSRRRTSTGKIDRRMVGKMCT------RRYEAN 127

  Fly   262 ARERRRMQNLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISALGDLLR 312
            ||||.|:|.|::.||:||..|| :.:|.::||..||::|.:||..||.:|:
 Worm   128 ARERNRVQQLSKMFDQLRVCLP-IEDDAKISKLATLKVASSYIGYLGAILQ 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 bHLH_TS_amos_like 250..311 CDD:381558 27/60 (45%)
hlh-10NP_505401.2 bHLH_SF 121..179 CDD:469605 29/64 (45%)

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