DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and hlh-3

DIOPT Version :10

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_495938.4 Gene:hlh-3 / 174447 WormBaseID:WBGene00001950 Length:170 Species:Caenorhabditis elegans


Alignment Length:61 Identity:26/61 - (42%)
Similarity:36/61 - (59%) Gaps:5/61 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 ITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYLP-CLGNDRQLSKHETLQMAQTYISAL 307
            :|...|:||    |.|||:|:..:||.|..|::.:| ..||..:|||.|||:.|..||..|
 Worm    23 VTKQTKQKR----NERERKRVDQVNQGFVLLQERVPKAAGNKAKLSKVETLREAARYIQEL 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 bHLH_TS_amos_like 250..311 CDD:381558 25/59 (42%)
hlh-3NP_495938.4 bHLH_TS_ASCL 28..83 CDD:381424 25/56 (45%)
COG3416 <47..>136 CDD:442642 14/33 (42%)

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