DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ato and atoh1c

DIOPT Version :10

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:XP_021336148.1 Gene:atoh1c / 100498672 ZFINID:ZDB-GENE-090805-1 Length:204 Species:Danio rerio


Alignment Length:59 Identity:41/59 - (69%)
Similarity:48/59 - (81%) Gaps:0/59 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 KRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISALGDLL 311
            :|:|||||||||||||..||.||||||..:|.:.:||:|||.|||||||.|||.|.:||
Zfish    69 RRRRRLAANARERRRMLGLNVAFDRLRSVIPNVESDRKLSKSETLQMAQIYISTLSELL 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 bHLH_TS_amos_like 250..311 CDD:381558 39/57 (68%)
atoh1cXP_021336148.1 bHLH_SF 80..127 CDD:469605 30/46 (65%)

Return to query results.
Submit another query.