DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and tcf21

DIOPT Version :10

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001103518.1 Gene:tcf21 / 100126209 XenbaseID:XB-GENE-484805 Length:179 Species:Xenopus tropicalis


Alignment Length:139 Identity:47/139 - (33%)
Similarity:71/139 - (51%) Gaps:36/139 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 SVEDDEDL----MLFSGGEDFDGNDGSFDLADGENQDAAA----------GGSGKKRR------- 244
            |:.|.||.    ||...|...|.|. .|.:::..|::::.          |.|||:|:       
 Frog     5 SLSDVEDFQEVEMLECDGIKLDPNK-EFGISNDSNEESSTCDNGSPKKGRGTSGKRRKAPSKKSP 68

  Fly   245 -------GKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQT 302
                   |||:       :|.|||||||.||:.|::||.||:..||.:..|.:|||.:||::|.:
 Frog    69 LGNINQEGKQV-------QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASS 126

  Fly   303 YISALGDLL 311
            ||:.|..:|
 Frog   127 YIAHLRQIL 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 bHLH_TS_amos_like 250..311 CDD:381558 27/60 (45%)
tcf21NP_001103518.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..87 16/71 (23%)
bHLH_TS_TCF21_capsulin 77..140 CDD:381547 30/66 (45%)

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