DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10445 and AT3G20010

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_188635.1 Gene:AT3G20010 / 821539 AraportID:AT3G20010 Length:1047 Species:Arabidopsis thaliana


Alignment Length:907 Identity:236/907 - (26%)
Similarity:366/907 - (40%) Gaps:264/907 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 SLKTLYEPIQPRPAIDDLEKQPALLLVRLLKHQQSCLKWMQFRERQKIS--GGILADDMGLGKTL 243
            :|:.|.:|      :.:.:..|..|.|.|::||:..|.||..:|....:  |||||||.|||||:
plant   259 ALQVLNQP------MTESDLPPGTLSVPLMRHQKIALAWMFQKETSSFNCPGGILADDQGLGKTV 317

  Fly   244 SMIALILASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMF--DDEEESGKEEE-QYEPP 305
            |.|||||..:.....|.|..                ||:..:..:.  |||.::.|.|. .:..|
plant   318 STIALILKQKIVSQLKSESS----------------CKQETEALVLDADDESDNAKHESGSHVKP 366

  Fly   306 EKRTCHVKTKKINQFRILD---DDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRY 367
            |     :|....::..:|.   :|:||:.|....|||:.:               ........:.
plant   367 E-----LKVSSNSETSVLSACGNDENDSSDMEKAEDEEAN---------------SSTRAFQWKR 411

  Fly   368 PSANTLVVCPMSVMCQWAHEVASKVAQNA-IRVLTFHGPNRHEIGIEAFRSYDLVITSYNLVVNE 431
            |:|.||:|||.||:.|||.|:..||::.: :.||.:||.||.:...| ...||:|:|:|.:|.||
plant   412 PAAGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNE-LAEYDVVVTTYAIVTNE 475

  Fly   432 ----------------LKRYGNTS------------------------------------PLFAV 444
                            ..|||..|                                    ||..|
plant   476 APNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSSEPDCGPLGKV 540

  Fly   445 YWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNFQDLQQW 509
            .|.|::||||..|:|.:|....|.|.|||...|.|:|||:||...|:::..||:....:...:.:
plant   541 GWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRYDPYAVYKSF 605

  Fly   510 KKNL-----NESMLGHRRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQ 569
            ...:     ..|..|:::|..:::.:||||||..|.....:..||...:.|..|..|..|.:.|:
plant   606 YSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPKVVNLSQVDFSVAERSFYK 670

  Fly   570 ILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKIL 634
            .|.|.|:   :||....:.|....||.:                                     
plant   671 KLEADSR---SQFKAYADAGTLSQNYAN------------------------------------- 695

  Fly   635 GIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDK------F 693
               ||:|||||||.|.||                |.||...||..|::....:..|.:      .
plant   696 ---ILLLLLRLRQACDHP----------------QLVKRYNSDPVGKVSEAAVRRLPREARSRLI 741

  Fly   694 DETDSEDDCCDE----------------------------EDSTRRDGNFKLEVIKDEI-KEENV 729
            :..:|....|.|                            :::|......|.::.:|.: .|.::
plant   742 NRLESSSAICYECNEPPEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQQLARDVVFSESSL 806

  Fly   730 PWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQ---FIRPSAKLKMVIDKLEELLTGTND--- 788
            ...:.||...:||.::.||.:           :||   |.  |:|:|.|:|.|:.|....:.   
plant   807 RNCTSDDSGCSSSHDNGLDRS-----------VFQKRDFC--SSKIKAVLDILQSLSQPDSPNSA 858

  Fly   789 -----------------------------------KIIVTSQWVSYLAIVRKRLQDLSWETLDFN 818
                                               |.|:.|||...|.:|..|:.:...|....:
plant   859 QHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGIEFRRLD 923

  Fly   819 GQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRY 883
            |.::...|:..:::|:...:.:|:|:||.||.:|||:..|.|::::||.|||..|.||.||.:|.
plant   924 GTMSLAARDRAVKEFSKKPDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRI 988

  Fly   884 GQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEE--GGEVTKCVGGGLNLAELKKLF 943
            |||:|..:.|...:||||.||..||:.|..:......||  |...|:     |.:.:||.||
plant   989 GQTRPVTVTRITIKDTVEDRILKLQEEKRTMVASAFGEEHGGSSATR-----LTVDDLKYLF 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 227/879 (26%)
DEAD-like_helicase_N 209..534 CDD:475120 111/390 (28%)
AT3G20010NP_188635.1 HepA <273..1025 CDD:440319 224/860 (26%)
RING-HC_CHR27-like 749..800 CDD:438504 5/50 (10%)

Return to query results.
Submit another query.