DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and Ercc6l

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001092144.1 Gene:Ercc6l / 317252 RGDID:1565734 Length:1230 Species:Rattus norvegicus


Alignment Length:923 Identity:199/923 - (21%)
Similarity:328/923 - (35%) Gaps:362/923 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 QLVQKILTMEQQQRQLEENA--SETKELCDLKLHL---EKLNARLEALGEFLDTLRLREDQQEIK 134
            ||.:..|...|:.::..:|.  .|..:|.:|...:   :|:.:|::.|.|.|:.|...||     
  Rat    16 QLAESYLRYSQEAKEAAKNGDLEEALKLFNLAKDIFPTKKVISRIQKLQEALEQLAEEED----- 75

  Fly   135 IEDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSLKTLYEPIQPRPAIDDLE 199
                .|..|...        |||..||:                      |||            
  Rat    76 ----DEFTDVCN--------SGLLLYRE----------------------LYE------------ 94

  Fly   200 KQPALLLVRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKK 264
                    :|.:||:..:.::....:....|||||||||||||:.:||.:               
  Rat    95 --------KLFEHQKEGIAFLYSLYKNGRKGGILADDMGLGKTVQIIAFL--------------- 136

  Fly   265 KALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDND 329
                                 ..|||                       ...:|           
  Rat   137 ---------------------SGMFD-----------------------ASLVN----------- 146

  Fly   330 AGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQ 394
                                                     :.|::.|.:::..|..|.|.... 
  Rat   147 -----------------------------------------HVLLIMPTNLINTWVKEFAKWTP- 169

  Fly   395 NAIRVLTFHGPNRHEIGIEAFRSY-------DLVITSYNLVVNELKRYGNTSPLFAVYWNRVILD 452
             .:||.||||.:::    |..|:.       .:|||:|.:::|..::..:.:.. |..|:.||||
  Rat   170 -GMRVKTFHGSSKN----ERIRNLTRIQQRNGVVITTYQMLLNNWQQLASFNGQ-AFVWDYVILD 228

  Fly   453 EAHIIRNSKTNCCNSVC--QLRAHCHWALTGTPVQNRGVDVFALLRFVNVPN-FQDLQQWKKNLN 514
            |||.|:::.|.  ::||  .:.|.....|||||:||...::::|..|....: ...|:.:|....
  Rat   229 EAHKIKSASTK--SAVCARAVPASNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYE 291

  Fly   515 ESML---------GHRRLNF--------IIKPLMLRRTKQKL-QASGDMPAL-PSLK---IELIC 557
            ..::         |.:.|.|        ||||..|||||::: ....|.|.: |..|   :|.||
  Rat   292 NPIIRAREKDATPGEKALGFKMSENLMEIIKPYFLRRTKEEVHMKKADKPEVRPGEKNSGVEDIC 356

  Fly   558 VQLS---KTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYE 619
            ..||   |.::.|:..|..:.::|:.:|:             ||:...:.:.     |..:.:.|
  Rat   357 EMLSLTRKNDLIVWIRLVPLQEEIYRKFV-------------SLDHIKELLM-----ETRSPLAE 403

  Fly   620 RFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLM---------IGMLRGALTAEDVQNVKVDA 675
                          ||:        |::.|.||.|:         :|.:  ..:||| :|.:.||
  Rat   404 --------------LGV--------LKKLCDHPRLLSARACHLLNLGTV--TFSAED-ENEQEDA 443

  Fly   676 SDVEGQLKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTA 740
            |:: |.:                                       |.:.:..:..:||      
  Rat   444 SNM-GSI---------------------------------------DHLSDNALMQESG------ 462

  Fly   741 SSFEDQLDSARALKLLNPQNPIFQFIRPSAKLKMV-IDKLEELLTGTNDKIIVTSQWVSYLAIVR 804
                                            ||: :..|.|.|.....:.:|.||....|.|:.
  Rat   463 --------------------------------KMIFLMALLERLQDEGHQTLVFSQSRQILNIIE 495

  Fly   805 KRLQDLSWETLDFNGQLT-AKEREIVLRDFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHW 868
            :.|::..::||..:|.:| ..|||..::.|..|.|..|.||:...|||||.|..|:.::|.|..|
  Rat   496 RLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAASRVVIFDPSW 560

  Fly   869 NPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGE---VTKCV 930
            ||..:.||.||:||.||.:...:||.:...|||::|...|..|..:.:....::...   .||  
  Rat   561 NPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFTK-- 623

  Fly   931 GGGLNLAELKKLF 943
                  .|||:||
  Rat   624 ------QELKELF 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 183/851 (22%)
DEAD-like_helicase_N 209..534 CDD:475120 73/351 (21%)
Ercc6lNP_001092144.1 HepA <95..612 CDD:440319 166/757 (22%)
DEXHc_ERCC6L 96..328 CDD:350759 73/351 (21%)

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