DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and rhp16

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_587701.1 Gene:rhp16 / 2538860 PomBaseID:SPCC330.01C Length:963 Species:Schizosaccharomyces pombe


Alignment Length:1022 Identity:223/1022 - (21%)
Similarity:382/1022 - (37%) Gaps:324/1022 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QSCSIQDQSSVP---VPDSSGEINNWMEPEPVDSLELSGEYADNESAIFVSASEYNEKKAQIDQL 76
            ||.:...|.|.|   :.|:|....:     ..|::|.      |.:..|.||   .::..:...|
pombe   171 QSNNTSSQHSTPPLSISDTSTHTGS-----STDNVEA------NPNTGFSSA---RKRSLRSSNL 221

  Fly    77 VQKILTMEQQQRQLE------ENASETKELCDLKLHLEKLNARLEALGEFLDTLRLREDQQEIKI 135
            .:|.:.:...:...|      :.:.|...:.|:| ..|..::::| :.|...:.....|::.|.:
pombe   222 KKKFVPLSSPEESNESEFIDDDESDEVASIIDIK-EDETFDSKVE-IPEAAPSSSTESDEESIPL 284

  Fly   136 EDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDS-LKTLYEPIQPRPAIDDL- 198
            ...|:                ..|...:|:.:|:...:.::..|.| .:|.|..|:..|.::.: 
pombe   285 SYQSK----------------RRRVSARASSSASSSSRTQAKSIPSHERTHYRLIRQHPELEHVW 333

  Fly   199 EK-------------QPALLLVRLLKHQQSCLKWMQFRERQKISGGILADDMGLGKTLSMIALIL 250
            ||             ||..|::.||..|:..:.|::.:|.....||||||:||:|||:..|||:|
pombe   334 EKLEEEAPREVKQIEQPKELVLNLLPFQREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALLL 398

  Fly   251 ASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTK 315
            :                                         |..||.                 
pombe   399 S-----------------------------------------EPRGKP----------------- 405

  Fly   316 KINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSV 380
                                                                    ||||.|:..
pombe   406 --------------------------------------------------------TLVVAPVVA 414

  Fly   381 MCQWAHEVASKVAQNAIRVLTFHGPNRHEIGIEAFRSYDLVITSYNLV--VNELKRYG------- 436
            :.||..|:.:. ...|:....::|..| :|..|...|||:|:||||::  |...:|.|       
pombe   415 IMQWKEEIDTH-TNKALSTYLYYGQAR-DISGEELSSYDVVLTSYNVIESVYRKERSGFRRKNGV 477

  Fly   437 --NTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVN 499
              ..|.|..:.:.|:||||||.|::...|...:||.||......|:|||:|||..::|:||||:.
pombe   478 VKEKSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLR 542

  Fly   500 VPNF---QDLQ------QW----KKNLNE----------------------------SMLGHRRL 523
            ...|   ..||      .|    :.|.:|                            ..|..:::
pombe   543 ADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEGPGKLAFKKV 607

  Fly   524 NFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREK 588
            :.::|.:|||||  ||:.:.|: .||...:|:.....::.|..|||.|...||:.|..:|.:   
pombe   608 HSLLKHIMLRRT--KLERADDL-GLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYLAE--- 666

  Fly   589 GNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCHPG 653
             ...||.|:                                       .|..|:.|:||...||.
pombe   667 -GVVLNNYA---------------------------------------NIFQLITRMRQMADHPD 691

  Fly   654 LMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDD------CCDEEDSTRRD 712
            |::...|..:..|:.:|:.....|...|            |..:|...      |..|..:...|
pombe   692 LVLASKRKTVDIENQENIVCKICDEVAQ------------DAIESRCHHTFCRLCVTEYINAAGD 744

  Fly   713 GNFKLEVIKDEIKEENV-------PWDSGDDLPTASSF-EDQLDSARALKLLNPQNPIFQFIRPS 769
            |             |||       |.......|....| |::..:|..|..::..:     .|.|
pombe   745 G-------------ENVNCPSCFIPLSIDLSAPALEDFSEEKFKNASILNRIDMNS-----WRSS 791

  Fly   770 AKLKMVIDKLEELLTGTND---KIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLR 831
            .|::.::::|  .|....|   |.||.||:.|.|.::..||:...:..:..:|.:|.|.|...:.
pombe   792 TKIEALVEEL--YLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIE 854

  Fly   832 DFNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMC 896
            .|:.:....:.|:||.||||.|||..|:.:.::|..||..::.||.|||:|.||.:|..:.....
pombe   855 AFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCI 919

  Fly   897 QDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLNLAELKKLF 943
            ::::|.:|..||:.|.::....:.::...:.:     |::.:::.||
pombe   920 ENSIESKIIELQEKKAQMIHATIDQDEKALNQ-----LSVEDMQFLF 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 200/889 (22%)
DEAD-like_helicase_N 209..534 CDD:475120 84/376 (22%)
rhp16NP_587701.1 HepA <319..943 CDD:440319 189/817 (23%)
RING-HC_RAD16-like 709..757 CDD:438229 11/72 (15%)

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