DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10445 and Hltf

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_033236.2 Gene:Hltf / 20585 MGIID:1196437 Length:1003 Species:Mus musculus


Alignment Length:1035 Identity:257/1035 - (24%)
Similarity:421/1035 - (40%) Gaps:270/1035 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HKQSCSIQDQSSVPVPDSSGEINNWMEPEPVDSLELSGEYADNESAIFVSASEY--NEKKAQIDQ 75
            :.:..::|.:.:.|...::.::||           ::|....:......:|..|  :.|.||::.
Mouse    79 NNEMVALQREPNNPYDKNAIKVNN-----------VNGNQVGHIKREIAAAVAYIMDNKLAQVEG 132

  Fly    76 LV----QKILTMEQQQR--QLEENASETKELCDLKLHLEKLNARLEALGEFLDTLRLREDQQEIK 134
            :|    ....||.....  ..|||.:...|  .||.|..||....:.||..|:.           
Mouse   133 VVPFGASNTFTMPLYMTFWGKEENRNVVLE--QLKKHGFKLGPTPKTLGSSLEN----------- 184

  Fly   135 IEDNSELVDHTEQPKWSNLYSGLNRYRQKANHTAAQFYQHKSNIIDSLKTLYEPIQPRPAIDD-- 197
                          .|.:..:|.: |.:.| |.|.|.      ..|.|||.::.:......||  
Mouse   185 --------------AWGSGRAGPS-YSRPA-HVAVQM------TTDQLKTEFDKLFEDLKEDDRT 227

  Fly   198 LEKQPA-LLLVRLLKHQQSCLKWMQFRERQK----------------------------ISGGIL 233
            :|.:|| .:...||.||:..|.||..||..|                            :.||||
Mouse   228 VEMEPAEAIETPLLPHQKQALAWMIARENSKELPPFWEQRNDLYYNTITNFSVKERPENVHGGIL 292

  Fly   234 ADDMGLGKTLSMIALILAS----------------------EETKNR------KREE-------- 262
            ||||||||||:.||:||.:                      :||..|      |:|:        
Mouse   293 ADDMGLGKTLTAIAVILTNFDDGRPLLSKRGKKNHPGKEYKDETIKRRGSNMDKKEDGHSESSTC 357

  Fly   263 ----------KKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKI 317
                      :|.:.||   .:.:.| |.:.||||:...|....:|.|..|.|:|....:|..::
Mouse   358 GEEPSISGTPEKSSCTL---SQLSSV-CPKRRKISVQYIESSDSEEIETSELPQKMKGKLKNVQL 418

  Fly   318 N-QFRILDDDDNDAGDKAVVEDE-----------QKDLLAKTPEPEVFSSDEEEEHLSNGRYPSA 370
            | :.|:       .|...|.||.           |:.:|.|.     .|..|..|....|....|
Mouse   419 NTKSRV-------KGSSKVKEDSKFALTFFASATQRKMLKKG-----MSMMECSEACDTGERTRA 471

  Fly   371 NTLVVCPMSVMCQWAHEVASKVAQNA-IRVLTFHGPNRHEIGIEAFRS-YDLVITSYNLVVNELK 433
             ||::||:||:..|..:....|.... :....::||:|  |...|:.| .|:::|:||::.::  
Mouse   472 -TLIICPLSVLSNWIDQFGQHVKSEVHLNFYVYYGPDR--IRDSAWLSKQDIILTTYNILTHD-- 531

  Fly   434 RYG--NTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLR 496
             ||  :.|||.::.|.||||||.|.|||.......:|.:|.|...|.|||||:||...|:::||.
Mouse   532 -YGTKDDSPLHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLS 595

  Fly   497 FVNVPNFQDLQQWKKNLNESML-----GHRRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELI 556
            |:.:..|.|.:.|.:.:...:.     |.|||..:||.:.|||||........:..||..|:.:.
Mouse   596 FLKLKPFIDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQ 660

  Fly   557 CVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERF 621
            .:.||:.|..:||.:              :.:|.:.:..|..|.|   :..|.:|          
Mouse   661 HITLSEEERKIYQSV--------------KNEGKAAIGRYFTEGT---VLAHYAD---------- 698

  Fly   622 LKSLGYNPGEKILGIYILVLLLRLRQFCCHPGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDV 686
                            :|.|||||||.|||..|:         ...:.:.....||...:|:..:
Mouse   699 ----------------VLGLLLRLRQICCHTHLL---------TNGMSSSGPSRSDTPEELRKML 738

  Fly   687 LAELDKFDETDSEDDCCDEEDST----------------------RRDGNFKLEVIKDEIKEENV 729
            :.::.....:.|:::|....||.                      ....:.|..:.::||..:|:
Mouse   739 IEKMKIILSSGSDEECAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLCRNEIHGDNL 803

  Fly   730 PWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFIRPSAKLKMVIDKLEELLT-GTNDKIIVT 793
            .....::|...|..|..::                 .:.|:|:..::..|.||.| ..|.|.:|.
Mouse   804 LECPPEELACDSDKESSME-----------------WKSSSKINALMHALIELRTKDPNIKSLVV 851

  Fly   794 SQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFNANNE---KRVLLLSLTAGGVGLNL 855
            ||:.::|:::...|:...:.....:|.:..|:|...::.|. |.|   ..::||||.||||||||
Mouse   852 SQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQ-NTEAGSPTIMLLSLKAGGVGLNL 915

  Fly   856 NVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIA 915
            ..|:.:.::|..|||..|.|..||.:|.||.:...|.:::.:|:||:.:..:|:.|.::|
Mouse   916 CAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRDLA 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 235/927 (25%)
DEAD-like_helicase_N 209..534 CDD:475120 122/419 (29%)
HltfNP_033236.2 DNA-binding. /evidence=ECO:0000250 38..287 51/253 (20%)
HIRAN 60..153 CDD:400928 13/84 (15%)
DEXHc_HLTF1_SMARC3 240..638 CDD:350829 122/419 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..373 6/55 (11%)
HepA <468..980 CDD:440319 154/584 (26%)
DEGH box 551..554 2/2 (100%)
RING-HC_HLTF 749..803 CDD:438172 7/53 (13%)
Interaction with SP1 and SP3. /evidence=ECO:0000250 919..1003 18/57 (32%)

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