DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10445 and ercc6l

DIOPT Version :10

Sequence 1:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster
Sequence 2:XP_002936822.1 Gene:ercc6l / 100135235 XenbaseID:XB-GENE-988849 Length:1361 Species:Xenopus tropicalis


Alignment Length:964 Identity:203/964 - (21%)
Similarity:314/964 - (32%) Gaps:408/964 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 MEPEPVDSLELSGEYADNESA---------IFVSASEYNEKKAQIDQLVQKILTMEQQQRQLEEN 93
            :|||.|:..||..:.|..|:.         .||.|||.:..                        
 Frog    22 VEPEQVERYELYVKKAKQEATSGNLEKAIKFFVKASEIHPS------------------------ 62

  Fly    94 ASETKELCDLKLHLEKLNARLEALGEFLDTLRLREDQQEIKIEDNSELVDHTEQPKWSNLYSGLN 158
                          :|::.|:|.|.|.|:.|.|:||..:       :.||        .|.|||.
 Frog    63 --------------DKIHRRIEKLKEALEELDLQEDADD-------DFVD--------VLNSGLT 98

  Fly   159 RYRQKANHTAAQFYQHKSNIIDSLKTLYEPIQPRPAIDDLEKQPALLLVRLLKHQQSCLKWMQFR 223
            .|.:..|    :.::|:...:..|.:||                                    |
 Frog    99 IYNELYN----KLFEHQKEGVAFLYSLY------------------------------------R 123

  Fly   224 ERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISM 288
            :.:|  |||||||||||||:.:|..:                                    ..|
 Frog   124 DGRK--GGILADDMGLGKTIQVIGFL------------------------------------SGM 150

  Fly   289 FDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVF 353
            ||.|                                                   |.|       
 Frog   151 FDSE---------------------------------------------------LIK------- 157

  Fly   354 SSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHE--IGIEAF- 415
                             ..|:|.|.:::..|..|......  .:||..|||.::.|  ..:|.. 
 Frog   158 -----------------YVLLVMPTTLISNWVKEFQKWTP--GLRVAEFHGTSKKERTRNLEKIQ 203

  Fly   416 RSYDLVITSYNLVVNELKRYGNTSPLFAVY------WNRVILDEAHIIRNSKTNCCNSVCQLRAH 474
            |...::||:|.:::|..::       .|.|      |:.:||||||.|:.|.|....|...:.|.
 Frog   204 RMSGIIITTYQMLINNWQQ-------LATYNGREFEWDYIILDEAHKIKTSSTKTAKSCHSIPAK 261

  Fly   475 CHWALTGTPVQNRGVDVFALLRF--------------------VNVPNFQDLQQWKKNLNESMLG 519
            ....|||||:||...:::||..|                    :.....:|....:|.|...:  
 Frog   262 NRILLTGTPIQNNLREMWALYDFACQGTLLGTSKTFKMEYENPITRAREKDATPGEKALGLKI-- 324

  Fly   520 HRRLNFIIKPLMLRRTKQ----------KLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAI 574
            ...|..||:|..|||||.          :.|.:...|::|||        ..|.:..|:..||.|
 Frog   325 SENLMKIIQPYFLRRTKSDVQNKKTERTRAQDTSQGPSMPSL--------TRKNDFIVWVYLSTI 381

  Fly   575 SKKIFTQFLLQREKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYIL 639
            .:.::.:|:             ||::..:.:....|.                           |
 Frog   382 QEDVYRKFI-------------SLDQIKELLMTTRSP---------------------------L 406

  Fly   640 VLLLRLRQFCCHPGLMI--GMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDC 702
            ..|..|::.|.||.|:.  ..::..|..:|..      |:.||..::     :.|||.       
 Frog   407 AELNILKKLCDHPRLLSARACIQLGLEGDDYH------SNEEGDHEL-----VTKFDH------- 453

  Fly   703 CDEEDSTRRDGNFKLEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFIR 767
                             :.|||                                        .|.
 Frog   454 -----------------LSDEI----------------------------------------LIE 461

  Fly   768 PSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRD 832
            .|.||.::||.|.: |.....:.:|.||....|.::.:.||:.:::.:..:|.:...|||..:..
 Frog   462 ESGKLLLLIDLLHK-LKEEGHRTLVFSQSRKMLDMIDRILQNKNFKVMRIDGTVALPEREKRISI 525

  Fly   833 FNANNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQ 897
            |.:||...||||:...|||||.|..|:.::|.|..|||..:.||.||.||.||.:...|||.:..
 Frog   526 FQSNNNYSVLLLTTQVGGVGLTLTAADRVVIFDPSWNPATDAQAVDRAYRIGQQENVVIYRLITC 590

  Fly   898 DTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCVGGGLN------LAELKKLFEM 945
            .|||::|...|..|..:           :.:..|...|      ..|||:||.:
 Frog   591 GTVEEKIYRRQIFKESL-----------IRQTTGDKKNPFRYFSKQELKELFSL 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10445NP_649751.2 HepA <113..919 CDD:440319 182/846 (22%)
DEAD-like_helicase_N 209..534 CDD:475120 71/353 (20%)
ercc6lXP_002936822.1 LapB <21..123 CDD:442196 35/193 (18%)
HepA <106..613 CDD:440319 165/801 (21%)
DEXHc_ERCC6L 107..339 CDD:350759 75/391 (19%)
MPH1 <482..753 CDD:440728 53/163 (33%)
Spy 1305..>1359 CDD:443119
Blue background indicates that the domain is not in the aligned region.

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