DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2616 and PMP34

DIOPT Version :10

Sequence 1:NP_649731.1 Gene:CG2616 / 40915 FlyBaseID:FBgn0037512 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster


Alignment Length:338 Identity:82/338 - (24%)
Similarity:143/338 - (42%) Gaps:73/338 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 ISACTGAMITACFMTPLDVIKTRMQSQQSPAHKCFFYSNGLMDHLFASGPNGSELASLRQRPQFS 159
            :|...|..|......|||.:::|:|.:::                       .::.|.||     
  Fly    20 VSGAAGGCIAMSTFYPLDTVRSRLQLEEA-----------------------GDVRSTRQ----- 56

  Fly   160 SSWDALMKISRHEGLAALWSGLGPTLVSALPSTIIYFVAYEQFKARYLQIYESHYNKSQEPRHLE 224
                .:.:|...||..:|:.||||.|.|...|..:||..:...||     ..|..:.||   |..
  Fly    57 ----VIKEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKA-----VASGGSPSQ---HSA 109

  Fly   225 IRDTKKSLPSVVPMMSGVTARICAVTVVSPIELVRTKMQAQ---------RQTYAQMLQFVRSVV 280
            ::|          ::.|..|.|..|...:|..:|.|:::.:         .:.|..:|:.::.|.
  Fly   110 LKD----------LLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVA 164

  Fly   281 ALQGVWGLWRGLRPTILRDVPFSGIYWPIYESLKQNLGH---GSQPSFSLSFLAGVMAGTVAAIV 342
            ..:|:.|||.|..|:::. |....:.:.:||.||:|:..   |...|.|..|: |.:|...|.::
  Fly   165 EKEGIAGLWSGTIPSLML-VSNPALQFMMYEMLKRNIMRFTGGEMGSLSFFFI-GAIAKAFATVL 227

  Fly   343 TTPFDVVKTHEQIEFGERVIFTDS-PARDFGK----KSTFSRLTGIYRTHGVRGLFAGCGPRLLK 402
            |.|..:|:|.::....|    :|| |:...|.    :||...:..|.:..|:||||.|...::|:
  Fly   228 TYPLQLVQTKQRHRSKE----SDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQ 288

  Fly   403 VAPACAIMISTFE 415
            .....|:|...:|
  Fly   289 TVLTAALMFMAYE 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2616NP_649731.1 Mito_carr 86..207 CDD:395101 26/111 (23%)
Mito_carr 230..321 CDD:395101 22/102 (22%)
Mito_carr 321..425 CDD:395101 28/100 (28%)
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 24/107 (22%)
Mito_carr 105..202 CDD:395101 26/110 (24%)
Mito_carr 214..303 CDD:395101 26/93 (28%)

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