DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG2616 and PMP34

Sequence 1:NP_001287212.1 Gene:CG2616 FlyBaseID:FBgn0037512 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001246615.1 Gene:PMP34 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster

Alignment Length:338 Identity:82/339 (24%)
Similarity:143/339 (42%) Gaps:73/339 (22%)


  Fly    95 ISACTGAMITACFMTPLDVIKTRMQSQQSPAHKCFFYSNGLMDHLFASGPNGSELASLRQRPQFS 159
            :|...|..|......|||.:::|:|.:::                       .::.|.||     
  Fly    20 VSGAAGGCIAMSTFYPLDTVRSRLQLEEA-----------------------GDVRSTRQ----- 56

  Fly   160 SSWDALMKISRHEGLAALWSGLGPTLVSALPSTIIYFVAYEQFKARYLQIYESHYNKSQEPRHLE 224
                .:.:|...||..:|:.||||.|.|...|..:||..:...||     ..|..:.||   |..
  Fly    57 ----VIKEIVLGEGFQSLYRGLGPVLQSLCISNFVYFYTFHALKA-----VASGGSPSQ---HSA 109

  Fly   225 IRDTKKSLPSVVPMMSGVTARICAVTVVSPIELVRTKMQAQ---------RQTYAQMLQFVRSVV 280
            ::|          ::.|..|.|..|...:|..:|.|:::.:         .:.|..:|:.::.|.
  Fly   110 LKD----------LLLGSIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVA 164

  Fly   281 ALQGVWGLWRGLRPTILRDVPFSGIYWPIYESLKQNLGH---GSQPSFSLSFLAGVMAGTVAAIV 342
            ..:|:.|||.|..|:::. |....:.:.:||.||:|:..   |...|.|..|: |.:|...|.::
  Fly   165 EKEGIAGLWSGTIPSLML-VSNPALQFMMYEMLKRNIMRFTGGEMGSLSFFFI-GAIAKAFATVL 227

  Fly   343 TTPFDVVKTHEQIEFGERVIFTDS-PARDFGK----KSTFSRLTGIYRTHGVRGLFAGCGPRLLK 402
            |.|..:|:|.::....|    :|| |:...|.    :||...:..|.:..|:||||.|...::|:
  Fly   228 TYPLQLVQTKQRHRSKE----SDSKPSTSAGSTPRTESTLELMISILQHQGIRGLFRGLEAKILQ 288

  Fly   403 VAPACAIMISTFE 415
            .....|:|...:|
  Fly   289 TVLTAALMFMAYE 301

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG2616NP_001287212.1 Mito_carr 86..207 CDD:278578 26/112 (23%)
Mito_carr 230..321 CDD:278578 23/103 (22%)
Mito_carr 321..425 CDD:278578 28/101 (28%)
PMP34NP_001246615.1 Mito_carr 15..96 CDD:278578 24/108 (22%)
Mito_carr 105..202 CDD:278578 26/111 (23%)
Mito_carr 214..303 CDD:278578 26/94 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C1986678
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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