DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and TUB4

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_013313.1 Gene:TUB4 / 850909 SGDID:S000004202 Length:473 Species:Saccharomyces cerevisiae


Alignment Length:463 Identity:139/463 - (30%)
Similarity:221/463 - (47%) Gaps:48/463 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
            |.|::..||.|..:|...|.....||.|..||  |:|...|  ..||....||.|....|..|||
Yeast     4 EIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSST--ERDDDTKPFFRENSRNKFTPRA 66

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQ 128
            :.:|.||:|:.:|. .|:|..|.|.......:  .|.|::|.| |.||....|.:|::|.|..|.
Yeast    67 IMMDSEPSVIADVE-NTFRGFFDPRNTWVASDGASAGNSWANG-YDIGTRNQDDILNKIDKEIDS 129

  Fly   129 CTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHT 193
            ....:||.:.||..||||||..|.|:|.|...|.||....::|:|| :.|..||:.||:||....
Yeast   130 TDNFEGFQLLHSVAGGTGSGLGSNLLEALCDRYPKKILTTYSVFPA-RSSEVVVQSYNTILALRR 193

  Fly   194 TLEHSDCAFMVDNEAIYDICRR-----NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLT 253
            .:|.||...:.||.::.:|..:     |:|::     :.|:||..|:||:|.|:||...:...::
Yeast   194 LIEDSDATVVFDNASLLNISGKVFRNPNIDLQ-----HTNQLISTIISSVTNSIRFPSYMYSSMS 253

  Fly   254 EFQTNLVPYPRIHFPLVTYAPVIS---AEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMAC 315
            ...:.|:|.|.:||...::.|..|   .:...|:..|..::.....:|:|.:|.....:..|...
Yeast   254 SIYSTLIPSPELHFLSPSFTPFTSDYIHDDIAHKGHSSYDVMLDLLDPSNSLVSTAMNNPTYFNV 318

  Fly   316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV--------VPGGDLAKVQ 372
            .....|:|.|:.::.|:.  |.::.|:|..|..:...|.|..:.|.:        |.|       
Yeast   319 YNTIIGNVEPRQISRAMT--KLQQRIKFPSWSSSAMHVNIGRRSPYLPLQPNENEVSG------- 374

  Fly   373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY-VGEGME-----EGEFSEAREDLAALEKD 431
               .||||.:.:...:....:.||.::||.||::.| ||:..:     :.||:|:||.:.:|.:|
Yeast   375 ---MMLSNMSTVVNVFENACNTFDKVFAKGAFLNNYNVGDLFQSMQNVQDEFAESREVVQSLMED 436

  Fly   432 YEEVGMDS 439
            |.....||
Yeast   437 YVAAEQDS 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 137/461 (30%)
TUB4NP_013313.1 gamma_tubulin 3..437 CDD:276957 135/454 (30%)

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