DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84D and Tubg2

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001386417.1 Gene:Tubg2 / 680991 RGDID:1585798 Length:451 Species:Rattus norvegicus


Alignment Length:445 Identity:138/445 - (31%)
Similarity:244/445 - (54%) Gaps:26/445 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            ||.|::.:||.|.|||...|:..|.||||.|:|.:....|  .|.|..:.||.:.....::||||
  Rat     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHYIPRAV 65

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            .:||||.|:..:...:|.:|::||.:...:.  .|.||:||| ::.|::|.:.:.|.|.:.||..
  Rat    66 LLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWARG-FSQGEKIHEDIFDIIDREADGS 129

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYP-APQVSTAVVEPYNSILTTHT 193
            ..|:||::.||..||||||..|.|:|||:..|.||....::|:| ..::|..||:||||:||...
  Rat   130 DSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKR 194

  Fly   194 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 258
            ..:::||..::||.|:..|....|.|:.|:::.:|:|:..|:|:.|.:||:.|.:|.||.....:
  Rat   195 LTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIAS 259

  Fly   259 LVPYPRIHFPLVTYAPVISAEK-AYHEQLSVAEITNACFEPANQMVKVDPRHGK-------YMAC 315
            |:|.||:||.:..|.|:.:.:. |...:.:|.::.....:|.|.||..    |:       |:|.
  Rat   260 LIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVST----GRDRQTNHCYIAI 320

  Fly   316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 380
            ..:.:|:|.|..|:.::..|:.::...|:.|.|...:|.::.:.|.:.....::.:     |::|
  Rat   321 LNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGL-----MMAN 380

  Fly   381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE---AREDLAALEKDY 432
            .|:|:..:.....::|.::.:.||:..:..|.:.:..|.|   :||.:..|..:|
  Rat   381 HTSISSLFESSCQQYDKLWKRGAFLEQFRKEDIFKDNFEEMDRSREVVQELIDEY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 138/445 (31%)
Tubg2NP_001386417.1 gamma_tubulin 3..435 CDD:276957 137/443 (31%)

Return to query results.
Submit another query.