DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84D and Tubb6

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_080749.2 Gene:Tubb6 / 67951 MGIID:1915201 Length:447 Species:Mus musculus


Alignment Length:449 Identity:181/449 - (40%)
Similarity:270/449 - (60%) Gaps:11/449 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
            |||.:.|..||.|.|||...||:...||||...|....|..:  ..:..:.:::|:.:.|:||||
Mouse     1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDQAGGYVGDSAL--QLERISVYYNESSSKKYVPRA 63

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
            ..|||||..:|.||:|.:.|||.|:..|.|:..|.||:|:||||.|.|:||.|||.:||..:.|.
Mouse    64 ALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCD 128

  Fly   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195
            .||||.:.||.|||||||..:||:.::..:|..:....|:|.|:|:||..||||||:.|:.|..:
Mouse   129 CLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLV 193

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |::|..:.:||||:||||.|.|.:..|||.:||.|:...:|.:|.||||.|.||.||.:...|:|
Mouse   194 ENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMV 258

  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVP 325
            |:||:||.:..:||:.:.....:..|:|.|:|...|:..|.|...|||||:|:....::||.:..
Mouse   259 PFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGPMSM 323

  Fly   326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            |:|:..:..|:.|.:..||:|.|...||.:...||        ..::.|...:.|:|||.|.:.|
Mouse   324 KEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPP--------RGLKMASTFIGNSTAIQELFKR 380

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
            :..:|..|:.::||:||:.||||:|.||:||..::..|..:|::. .|:...:||.|.|
Mouse   381 ISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQY-QDATVNDGEEAFE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 176/437 (40%)
Tubb6NP_080749.2 PLN00220 1..431 CDD:215107 177/440 (40%)
MREI motif. /evidence=ECO:0000250|UniProtKB:P07437 1..4 2/2 (100%)

Return to query results.
Submit another query.