DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and Tuba3b

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_033475.1 Gene:Tuba3b / 22147 MGIID:1095408 Length:450 Species:Mus musculus


Alignment Length:70 Identity:16/70 - (22%)
Similarity:25/70 - (35%) Gaps:18/70 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WLWSFVFRLLMNPEAC--SIVT----------FIGDGLR--FRIIDIKALAFLYYYPNDRDIFTD 73
            |.|. |.........|  |:||          |.|||.:  .|...:..:.:|...|:.   :..
Mouse   235 WPWQ-VSLQYSGQHTCGGSLVTPNWVVTAAHCFNGDGRKALSRWTVVSGITYLSSTPSS---YVK 295

  Fly    74 QEVVN 78
            :.:||
Mouse   296 EIIVN 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 16/70 (23%)
Tuba3bNP_033475.1 PTZ00335 1..440 CDD:185562 16/70 (23%)
MREC motif. /evidence=ECO:0000250|UniProtKB:P68363 1..4
Blue background indicates that the domain is not in the aligned region.

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