DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84D and LOC1269984

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_308639.4 Gene:LOC1269984 / 1269984 VectorBaseID:AGAMI1_012079 Length:449 Species:Anopheles gambiae


Alignment Length:450 Identity:302/450 - (67%)
Similarity:372/450 - (82%) Gaps:6/450 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
            |||.|||.|||||.|||||||:|:..||||||||.|..::.|   :::...||.:|.:|:.|||:
Mosquito     1 MREVISIQVGQAGCQIGNACWQLFTTEHGIQPDGLMAPNQAV---EENMAAFFQDTRSGRVVPRS 62

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
            :|:|||.:|:|::|..:|:||:|||.:|.||||||||:||||||:||:|:|.|.:.||||::||.
Mosquito    63 IFIDLEESVIDDIRNSSYKQLYHPEYMIMGKEDAANNFARGHYTVGKQIIDRVGNTIRKLSEQCD 127

  Fly   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195
            ||||||:||||||||||||||||::::.:||.||.||:|||||:|::|||||||||::|.||.|:
Mosquito   128 GLQGFLLFHSFGGGTGSGFTSLLLDQIVMDYAKKCKLQFAVYPSPKISTAVVEPYNAVLCTHGTM 192

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            ..|||.|::||||.|:||.:.|.|:||.||:||.|:.|:|||.||||||.|.:||||.|||||||
Mosquito   193 NTSDCCFIMDNEATYEICSKTLQIDRPHYTDLNALVAQVVSSATASLRFKGTMNVDLNEFQTNLV 257

  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVP 325
            |:||:|:|||:|||::||.||.||..|||||.:|||...|.|||.|||||||||||||:||||||
Mosquito   258 PFPRVHYPLVSYAPLVSASKASHESSSVAEIASACFTADNTMVKCDPRHGKYMACCMLFRGDVVP 322

  Fly   326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            ||.|.|:|.||.||.|.||||||||||:|||.|.|:|:||.:|||.:||||||||:|||:|||||
Mosquito   323 KDTNEAVAAIKKKRHISFVDWCPTGFKIGINQQAPSVLPGSELAKPKRAVCMLSNSTAISEAWAR 387

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY 450
            |:.|:||||.||||||||||||||||||||||||||.||:|||||   :||....|.|.|
Mosquito   388 LNQKYDLMYKKRAFVHWYVGEGMEEGEFSEAREDLACLERDYEEV---AGDTVASGEEYY 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 297/437 (68%)
LOC1269984XP_308639.4 alpha_tubulin 2..432 CDD:276955 294/432 (68%)

Return to query results.
Submit another query.