DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and Grid1

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_077354.1 Gene:Grid1 / 79219 RGDID:68366 Length:1009 Species:Rattus norvegicus


Alignment Length:507 Identity:111/507 - (21%)
Similarity:200/507 - (39%) Gaps:89/507 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 KKGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLIGSTVLTEKPPGFG-DMEYLA---DDKQLQ-- 251
            |||..|...|..:|....:      ..::...::|:|.    ...|| ||..||   .:|.|.  
  Rat   370 KKGHITGLTGVMEFREDSS------NPYVQFEILGTTY----SETFGKDMRKLATWDSEKGLNGS 424

  Fly   252 -QLDPM----QRKTYQLFQLVERMFNL-------------SLAISLTD----------------- 281
             |..||    |..|.::..::|..|.:             ..:|.:.|                 
  Rat   425 LQERPMGSRLQGLTLKVVTVLEEPFVMVAENILGQPKRYKGFSIDVLDALAKALGFKYEIYQAPD 489

  Fly   282 -KWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIK 345
             ::|..|.|.||:|::|::.|:.||.|:..|....:|:..|.:|......::..|.:.|......
  Rat   490 GRYGHQLHNTSWNGMIGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIKKPEEKISI 554

  Fly   346 NIFFEPLSNQVWWCVLAL--VTGSTILLLFHVRLERMLSNMENR-------FSFVWFTMLETYLQ 401
            ...|.|....||.|:.|.  |.|..|.:|..::..|..|..:.|       .|.:|. :...::|
  Rat   555 FSLFAPFDFAVWACIAAAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWI-VYGAFVQ 618

  Fly   402 QGPANEIFRLFSTRLLISLSCIFSFMLMQFY----GAFIVGSLLSESARSIVNLQALYDSNLAIG 462
            ||..:.: ...:.|:::....:|:.::...|    .||:..|.:....|:..:|....:.:....
  Rat   619 QGGESSV-NSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDSPVRTFQDLSKQLEMSYGTV 682

  Fly   463 MENISYNFPIFTNTSNQLVRDVYV----KKICKSG--EHNIMSLQQGAERIIQGRFAF--HTAID 519
            .::..|.: .....:|.|.:|...    :.|.|:|  ::.:.:..:|..:..:|.:||  ..|:.
  Rat   683 RDSAVYEY-FRAKGTNPLEQDSTFAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLWDVAVV 746

  Fly   520 RMYRLLLELQMDEAEFCDLQEVMFNLPYDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWM 584
            . |..|.:   |:.....:...:.:..|  |..:..|||:|:..:..:|..:.||.|....:||.
  Rat   747 E-YAALTD---DDCSVTVIGNSISSKGY--GIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWW 805

  Fly   585 VRRPDCSLFKTSQAEVD-----LEHFAPALFALALAMVASALVFLLELFLHW 631
            .....|.|...|.|:.|     |..||.....||:.::.:.||..|||:  |
  Rat   806 PHTGRCDLTSHSSAQTDGKSLKLHSFAGVFCILAIGLLLACLVAALELW--W 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 19/72 (26%)
Lig_chan 353..602 CDD:459656 56/274 (20%)
Grid1NP_077354.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436 19/75 (25%)
PBP1_iGluR_delta_1 25..425 CDD:380615 16/64 (25%)
PBP2_iGluR_delta_1 436..806 CDD:270448 75/378 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..960
Blue background indicates that the domain is not in the aligned region.

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