DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and grin2aa

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_021329529.1 Gene:grin2aa / 563297 ZFINID:ZDB-GENE-070424-129 Length:1460 Species:Danio rerio


Alignment Length:534 Identity:96/534 - (17%)
Similarity:187/534 - (35%) Gaps:145/534 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 LIIEKKGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLIGSTVLTEKPP------GFGDMEYLADD 247
            :::.|...|      :|.|.::|                 ..||.|.|      .|||.|  .||
Zfish   361 IVLNKDREW------EKMGKWEN-----------------QSLTLKYPVWPRFNSFGDAE--TDD 400

  Fly   248 KQLQQLDPMQRKTYQLFQLVERM------------------------------------------ 270
            ..| .:..::.|.:.:.:.|||:                                          
Zfish   401 NHL-TIVTLEEKPFVIVENVERLTGTCMRNSVPCRKHIKDNTTEGGGTYIKKCCKGFCIDILKKI 464

  Fly   271 -----FNLSLAISLTDKWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQ 330
                 |...|.:....|.|:.::| .|:|::|:|.:::|..||..:....:|...:.:|......
Zfish   465 ARNVKFTYDLYLVTNGKHGKKINN-VWNGMVGEVVNKKAVMAVGSLTINEERSEVIDFSVPFVET 528

  Fly   331 NIHFLFRHPRRSHIKNIFFEPLSNQVW---WCVLALVTGSTILLLFHVR---LERMLS------- 382
            .|..:......:...:.|.||.|..||   :.:|.|||...:.:..::.   ..|.|:       
Zfish   529 GISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHG 593

  Fly   383 ---NMENRFSFVWFTMLETYLQ-QGPANEIFRLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSE 443
               .|......:|..:....:. |.|...     :::.::|:...|:.:.:..|.|.:...::.|
Zfish   594 PSFTMGKAVWLLWGLVFNNSVPVQNPKGT-----TSKFIVSVWAFFAVIFLASYTANLAAFMIQE 653

  Fly   444 ------SARSIVNLQALYDSN--LAIGM-------ENISYNFPIFTNTSNQLVRDV--YVKKICK 491
                  :..|....|:.|..:  ...|.       .||..|:|           |:  |:.|..:
Zfish   654 EFVDQVTGLSDKKFQSPYSYSPPFRFGTVPNGSTERNIRKNYP-----------DMHQYMVKYHQ 707

  Fly   492 SGEHN-IMSLQQGAERIIQGRFAFHTAIDRMYRLLLELQMDEAEFCDLQEVMFNLPYDS---GSV 552
            :|.:: ::||:.|.    ...|.:..|:       |.......|.|.|..:.....:.:   |..
Zfish   708 TGVNDALVSLKTGK----LDAFIYDAAV-------LNYMAGRDEGCKLVTIGSGYIFATTGYGIA 761

  Fly   553 MPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAEVDLEHFAPALFALALAMV 617
            :.|||.|:..:..|:|.....|.::..:.:|:.........:...:::|:::.|...:.||.||.
Zfish   762 LQKGSLWKRPVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLATAMG 826

  Fly   618 ASALVFLLELFLHW 631
            .|.:.|:.|...:|
Zfish   827 LSLITFVWEHLFYW 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 17/72 (24%)
Lig_chan 353..602 CDD:459656 48/286 (17%)
grin2aaXP_021329529.1 PBP1_iGluR_NMDA_NR2 33..384 CDD:380601 7/45 (16%)
PBP2_iGluR_NMDA_Nr2 400..799 CDD:270436 72/427 (17%)
NMDAR2_C 836..1460 CDD:463148 1/5 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.