DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and grid2

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:584 Identity:126/584 - (21%)
Similarity:237/584 - (40%) Gaps:92/584 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 TAVLVLNSEH-VLVRRQVFGVASEAGYFNNSLAWFILGSGRESLPVEQLIDQLLSGYRMGIDADI 161
            |.:|:.|:.| .|..|:...:||.:.....|..|    .|.:|         :|...:.|..:.:
Zfish   330 TVLLLANTFHRKLEDRKWHSMASLSCIRKGSKPW----QGGKS---------MLETVKKGGVSGL 381

  Fly   162 TVALRGPDNAS--MLFYDVYRISRQANTPLIIEKKGLWTHSGGYQKFGNFKNTWVIRR--RNFLN 222
            |..|...||.|  .:.:::...:...:....:.:...|....|      ...|...|:  .|...
Zfish   382 TSLLEFNDNGSNPNIHFEILGTNYGEDRGRGVSRLATWDPIHG------LNGTLTDRKLENNMRG 440

  Fly   223 VTLIGSTVLTEKPPGFGDMEYLADDKQLQ--QLDPMQRKTYQLFQLVERMFNLSLAISLTDKWGE 285
            |.|...||| |:|........|...|:.|  .:|.:......|      .|...:.::...|:|.
Zfish   441 VVLRVVTVL-EEPFVMVSENVLGKPKKYQGFSIDVLDALANYL------GFKYEIYVAPDHKYGS 498

  Fly   286 LLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKNIFFE 350
            ...:|:|:|::|::..:.||..:..:....:|:..|.::......::..|.|...|:........
Zfish   499 QQADGTWNGLIGELVFKRADVGLSALTITPERESVVDFTTRYMDYSVGVLLRKAERTVDMFACLA 563

  Fly   351 PLSNQVWWCV--LALVTGSTILLLFHVRLERM-LSNMENR--FSFVWFTMLETYLQQGPANEI-F 409
            |....:|.|:  ..|:.|:.:.||..:...|: :.::.:.  ::.:|| :..:::|||  .|: :
Zfish   564 PFDLSLWACIAGTVLLVGTLVYLLNWLNPPRLPMGSVSSTTLYNSMWF-VYGSFVQQG--GEVPY 625

  Fly   410 RLFSTRLLISLSCIFSFMLMQFY----GAFIVGSLLSESARSIVNL-------------QALYDS 457
            ...:||:::.:..:|:.:::..|    .||:..|.:..|.:|:.:|             .|:||.
Zfish   626 TTLATRMMMGVWWLFALIVISSYTANLAAFLTISRIENSIQSLQDLAKQTDLPYGTVLDSAVYDQ 690

  Fly   458 NLAIGMENISYNFPIFTNTSNQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAF--HTAIDR 520
            ..:.||.....: |:::.....:.|       ....|:|:...::|..::..|||||  ..|:  
Zfish   691 VRSKGMNPFERD-PMYSQMWRMINR-------TGGAENNVEESKEGIRKVKYGRFAFVWDAAV-- 745

  Fly   521 MYRLLLELQMDEAEFCDLQEVMFNLP---YDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKK 582
                 ||......|.|.|..|..|:.   |  |..|..|||:|:..:..:|..:..|.:.....|
Zfish   746 -----LEYVAINDEDCSLYTVSNNVADRGY--GMAMQHGSPYRDIFSQRILELQQNGDMDILKLK 803

  Fly   583 WMVRRPDCSLF-----KTSQAEVDLEHFAPALFALALAMVASALVFLLELFLHWLPDFRRRLGT 641
            |..|...|.|:     :.|.:.:|:..||...|.||..:|.|.|:..:|.   |   :.||.|:
Zfish   804 WWPRDSPCDLYSPVGTRKSGSALDIHSFAGVFFVLAAGVVLSCLIATVET---W---WTRRKGS 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 5/14 (36%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 14/72 (19%)
Lig_chan 353..602 CDD:459656 61/281 (22%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..429 CDD:380614 21/117 (18%)
PBP2_iGluR_delta_2 440..806 CDD:270449 84/392 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.