Protein Alignment Ir84a and gria3b

DIOPT Version :10

• Sequence 1: NP_649720.2
• Gene: Ir84a / 40891
• FlyBaseID: FBgn0037501
• Length: 644
• Species: Drosophila melanogaster
• Sequence 2: NP_938174.1
• Gene: gria3b / 368416
• ZFINID: ZDB-GENE-030616-53
• Length: 883
• Species: Danio rerio
• Alignment Length: 587
• Identity: 136/587 - (23%)
• Similarity: 240/587 - (40%)
• Gaps: 116/587 - (19%)

  Fly    99 AVLVLNSEHVLVRRQVFGVA--SEAG--YFNNSLAWFILGSGRESLPVEQLIDQL-LSGYRMGID 158
            |:||:......:|||...|:  ..||  ..|.::.|      .:.:.:|:.:..: :.|....|.
Zfish   303 AILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPW------SQGIDIERALKMVQVQGMTGNIQ 361

  Fly   159 ADITVALRGPDNASMLFYDVYRISRQANTPLIIEKKGLWTHSGGYQKFGNFKNTWVIRRRNFL-N 222
            .|   :.....|.::   |||.:  :...|   .|.|.|..   :::|.|..:.......:.: |
Zfish   362 FD---SFGRRTNYTI---DVYEM--KTGGP---RKIGYWNE---FERFVNIMDQQFTNDSSSVEN 412

  Fly   223 VTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPMQRKTYQLFQLVERM-----FNLSLAISLTDK 282
            .|::.:|:: |.|       |:...|....|:..::.......|...:     ....|:|.:..|
Zfish   413 RTIVVTTIM-EAP-------YVMYKKNHMHLEGNEKYEGYCVDLASEIAKHVGIKYRLSIVMDGK 469

  Fly   283 WGEL-LDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKN 346
            :|.. .:..||:|::|::....||.||.|:...|.|:..:.:|....:..|..:.:.|::|....
Zfish   470 YGARDPETKSWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 534

  Fly   347 I-FFEPLSNQVWWCVLALVTGSTILLLFHVRL---ERMLSNME---------------NRFSFVW 392
            . |.:||:.::|.|::....|.:::|....|.   |..|...:               ..|:.:|
Zfish   535 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWQLDETDEVKDPQTPPDPPNDFGIFNSLW 599

  Fly   393 FTMLETYLQQG----PANEIFRLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSESARSIVNLQA 453
            |: |..::|||    |     |..|.|::..:...|:.:::..|.|.:...|..|  |.:..:::
Zfish   600 FS-LGAFMQQGCDISP-----RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVE--RMVSPIES 656

  Fly   454 LYDSNLAIGMENISYNFPIFTNTSNQLVR----DVYVK--KICKSGEHNIM--SLQQGAERI--I 508
            ..|  ||...| |:|. .:.:.::.:..|    .||.|  ...||.|.::.  :...|..|:  .
Zfish   657 AED--LAKQTE-IAYG-TLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVARVRKS 717

  Fly   509 QGRFAFHTAIDRMYRLLLELQMDE----AEFCDLQEVMFNLPYDS---GSVMPKGSPWREHLAHA 566
            :|:|||          |||..|:|    .:.||..:|..||  ||   |...||||..|..:..|
Zfish   718 KGKFAF----------LLESTMNEYIEQRKPCDTMKVGGNL--DSKGYGVATPKGSALRNAVNLA 770

  Fly   567 LLHFRATGLLQYNDKKWMVRRPDC------SLFKTSQAEVDLEHFAPALF----ALALAMVASAL 621
            :|.....|||.....||...:.:|      |..|||  .:.|.:.|...:    .|.|||:.:.:
Zfish   771 VLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTS--ALSLSNVAGVFYILVGGLGLAMMVALI 833

  Fly   622 VF 623
            .|
Zfish   834 EF 835

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir84a	NP_649720.2	ATP-sulfurylase	<54..>112	CDD:460310	3/12 (25%)
		Periplasmic_Binding_Protein_Type_2	<282..>355	CDD:473866	20/74 (27%)
		Lig_chan	353..602	CDD:459656	73/293 (25%)
gria3b	NP_938174.1	Periplasmic_Binding_Protein_type1	25..398	CDD:471960	24/114 (21%)
		PBP2_iGluR_AMPA	412..794	CDD:270433	99/413 (24%)