DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and GluRIIC

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_608557.4 Gene:GluRIIC / 33275 FlyBaseID:FBgn0046113 Length:940 Species:Drosophila melanogaster


Alignment Length:449 Identity:83/449 - (18%)
Similarity:168/449 - (37%) Gaps:90/449 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PPGFGDMEYLADDKQLQQLDPMQRKTYQ-----LFQLVERMFNLS-LAISLTD-KWGEL-LDNGS 291
            ||      |.:.::..::|:......||     |...:.|..... :.:.:.| ::|:| .:...
  Fly   431 PP------YFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQ 489

  Fly   292 WSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFL-FRHPRRSHIKNIFFEPLSNQ 355
            |:|::|::.:.:|...:|.:.....|:..|.::.......:..| ::.|......:.:..|...:
  Fly   490 WNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVEKTLDAYLAPFGGE 554

  Fly   356 VWWCVLALVTGSTILLLFHVRLERM--------------LSNMENRFSFVWFTMLETYLQQGPAN 406
            ||..:|..|...|.|.....|:.:|              |.|.....:..|.|:..  :.....:
  Fly   555 VWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDPEVLENQWRIHNTGWLTVAS--IMTAGCD 617

  Fly   407 EIFRLFSTRLLISLSCIFSFMLMQFY----GAFIVGSLLSESARSIVNLQA-------------- 453
            .:.|....|:..:...||:.::...|    .||:..|.:..|..::.:|.|              
  Fly   618 ILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDLSAQKKVKFGTIYGGST 682

  Fly   454 ---LYDSNLAIGMENISYNFPIFTNTSNQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFH 515
               |.|||..:        :.:..|..|......|.|       .|:    :|.:|:.:.|    
  Fly   683 YNLLADSNETV--------YRLAFNLMNNDDPSAYTK-------DNL----EGVDRVRKNR---- 724

  Fly   516 TAIDRMYRLLLE---LQMDEAEFCDLQEV--MFNLPYDSGSVMPKGSPWREHLAHALLHFRATGL 575
                ..|..|:|   |:....:.|||:.|  .|...:.:.:| |.|:.:|.:|:.|:|.....|.
  Fly   725 ----GDYMFLMETTTLEYHREQNCDLRSVGEKFGEKHYAIAV-PFGAEYRSNLSVAILKLSERGE 784

  Fly   576 LQYNDKKWMVRRPDCSLFK----TSQAEVDLEHFAPALFALALAMVASALVFLLELFLH 630
            |....:||. :.|:.|.|:    .:..::..|......:.|...::.:.|:.:.|..::
  Fly   785 LYDLKQKWW-KNPNASCFEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVY 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 12/74 (16%)
Lig_chan 353..602 CDD:459656 58/292 (20%)
GluRIICNP_608557.4 Periplasmic_Binding_Protein_type1 26..409 CDD:471960
PBP2_iGluR_Kainate 423..794 CDD:270432 76/399 (19%)
Lig_chan 554..827 CDD:459656 60/303 (20%)
Blue background indicates that the domain is not in the aligned region.

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