DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and Grin2a

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_032196.2 Gene:Grin2a / 14811 MGIID:95820 Length:1464 Species:Mus musculus


Alignment Length:692 Identity:127/692 - (18%)
Similarity:228/692 - (32%) Gaps:197/692 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 MSANFED--------------LMFYGSPRTAVLVLNSEHVLVRRQVFGVASEAGYFNNSLAWFI- 132
            :..:|||              ::.|.|...|||:|:.            |...|.......|.: 
Mouse   206 LDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSE------------ARSLGLTGYDFFWIVP 258

  Fly   133 -LGSGRESLPVEQLIDQLLS-GYRMGIDADITVALRGPDNASMLF-----------------YDV 178
             |.||...|..::....|:| .|.   |.|.::..|..|...:|.                 ...
Mouse   259 SLVSGNTELIPKEFPSGLISVSYD---DWDYSLEARVRDGLGILTTAASSMLEKFSYIPEAKASC 320

  Fly   179 YRISRQANTPL----------IIEKKGLWTHSGGYQ-----------------KFGNFKNTWVIR 216
            |..:.:..|||          ..:.|.|.....|||                 |.|.::|.    
Mouse   321 YGQTEKPETPLHTLHQFMVNVTWDGKDLSFTEEGYQVHPRLVVIVLNKDREWEKVGKWENQ---- 381

  Fly   217 RRNFLNVTLIGSTVLTEKPPGFGDMEYLADDKQL-------------QQLDPMQ----------R 258
                   ||.....:..:...|.|.|  .||..|             :.:||:.          |
Mouse   382 -------TLSLRHAVWPRYKSFSDCE--PDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCR 437

  Fly   259 KTYQL------------------FQLVERM-----FNLSLAISLTDKWGELLDNGSWSGVMGQVT 300
            |..::                  ..:::::     |...|.:....|.|:.::| .|:|::|:|.
Mouse   438 KFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKKVNN-VWNGMIGEVV 501

  Fly   301 SREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKNIFFEPLSNQVW--WCVLAL 363
            .:.|..||..:....:|...|.:|.......|..:......:...:.|.||.|..||  ..|:.|
Mouse   502 YQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLL 566

  Fly   364 VTGSTILLLFH----VRLERMLS----------NMENRFSFVWFTMLETYLQ-QGPANEIFRLFS 413
            :..:..:.:|.    |...|.|:          .:......:|..:....:. |.|...     :
Mouse   567 IVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGT-----T 626

  Fly   414 TRLLISLSCIFSFMLMQFYGAFIVGSLLSE------SARSIVNLQALYDSN--LAIGM------- 463
            :::::|:...|:.:.:..|.|.:...::.|      :..|....|..:|.:  ...|.       
Mouse   627 SKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTE 691

  Fly   464 ENISYNFPIFTNTSNQLVRDVYVKKICKSG-EHNIMSLQQGAERIIQGRFAFHTAIDRMYRLLLE 527
            .||..|:|....         |:.|..:.| |..::||:.|.    ...|.:..|:       |.
Mouse   692 RNIRNNYPYMHQ---------YMTKFNQRGVEDALVSLKTGK----LDAFIYDAAV-------LN 736

  Fly   528 LQMDEAEFCDLQEVMFNLPYDS---GSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPD 589
            .:....|.|.|..:.....:.:   |..:.|||||:..:..|||.|...|.::..:..|:.....
Mouse   737 YKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGICH 801

  Fly   590 CSLFKTSQAEVDLEHFAPALFALALAMVASALVFLLELFLHW 631
            ....:...:::|:::.|...:.||.||..|.:.|:.|...:|
Mouse   802 NEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHLFYW 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 9/42 (21%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 18/72 (25%)
Lig_chan 353..602 CDD:459656 50/284 (18%)
Grin2aNP_032196.2 PBP1_iGluR_NMDA_NR2 32..387 CDD:380601 38/206 (18%)
PBP2_iGluR_NMDA_Nr2 403..802 CDD:270436 75/424 (18%)
NMDAR2_C 839..1464 CDD:463148 1/5 (20%)

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