DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and Grik5

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:698 Identity:153/698 - (21%)
Similarity:272/698 - (38%) Gaps:191/698 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IILTAFLRVLQIESI---NTNFLELAAFE-------DFLRSEHLSHVLVVRGDDADGDWKIECHQ 68
            |:.|....:|.::.|   ::|.|..:.|.       :|:||.::|             |:..|  
Mouse   266 ILTTMDFPILHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMS-------------WRENC-- 315

  Fly    69 KLLANYRVQFYRPEMSANFEDLMFYGSPRTAVLVLNSEHVLV-------RRQVFGV--------- 117
                               |...:.|...:|.|:.::.||:|       |.|..||         
Mouse   316 -------------------EASTYPGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSAN 361

  Fly   118 -----ASEAGY--------------FNNSLAWFILGSGRESLPVEQLIDQLLSGYR-MGI-DADI 161
                 .|...|              ||:        .|:.:....:::::...|:| :|: .::.
Mouse   362 IWPHGTSLMNYLRMVEYDGLTGRVEFNS--------KGQRTNYTLRILEKSRQGHREIGVWYSNR 418

  Fly   162 TVALRGPDNASMLFYDVYRISRQANTPLIIEKKGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLI 226
            |:|:    ||:.|  |:......||..|::..              ..:|.:|:||.||  ..|.
Mouse   419 TLAM----NATTL--DINLSQTLANKTLVVTT--------------ILENPYVMRRPNF--QALS 461

  Fly   227 GSTVLTEKPPGF-GDMEYLADDKQLQQLDPMQRKTYQLFQLVERMFNLSLAISLTDKWGELLDNG 290
            |:    |:..|| .||        |::|..:.|..|:| :|||           ...:|....||
Mouse   462 GN----ERFEGFCVDM--------LRELAELLRFRYRL-RLVE-----------DGLYGAPEPNG 502

  Fly   291 SWSGVMGQVTSRE-ADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFR-HPRRSHIKNIFFEPLS 353
            ||:|::|::.:|: ||.||.......:|:..:.:|....|..|..|:| |..|......|.:|.|
Mouse   503 SWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFS 567

  Fly   354 NQVW-WCVLALVTGSTILLLF-----------HVRLERMLSNMENRFSF---VWFTMLETYLQQG 403
            ..|| :.:||.:..|.:|.|.           |..|......:||:::.   :||. :..::|||
Mouse   568 PAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFP-VGGFMQQG 631

  Fly   404 PANEIF-RLFSTRLLISLSCIFSFMLMQFYGAFIVGSLL-------SESARSIVNLQALYDSNLA 460
              :||. |..|||.:..:...|:.:::..|.|.:...|.       .|||..:.:     .:|:.
Mouse   632 --SEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLAD-----QTNIE 689

  Fly   461 IGMENISYNFPIFTNTSNQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFHTAIDRMYRLL 525
            .|..:.......|.|:..|..:.::.....|.....:.|.::|..|::..|:||          |
Mouse   690 YGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAF----------L 744

  Fly   526 LELQMDEAE---FCDLQEV---MFNLPYDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWM 584
            ||..|:|..   .|:|.::   :....|..|  ||.|||:|:.:..|:|..:....|:...:||.
Mouse   745 LESTMNEYHRRLNCNLTQIGGLLDTKGYGIG--MPLGSPFRDEITLAILQLQENNRLEILKRKWW 807

  Fly   585 VRRPDCSLFKTSQAE-VDLEHFAPALFALALAMVASALVFLLELFLHW 631
             ....|...:..:|: :.:|:.......|...::.:..|.::|..  |
Mouse   808 -EGGRCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFI--W 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 9/64 (14%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 23/74 (31%)
Lig_chan 353..602 CDD:459656 64/278 (23%)
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 34/203 (17%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:473866 107/431 (25%)

Return to query results.
Submit another query.