DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and Grik4

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_780690.2 Gene:Grik4 / 110637 MGIID:95817 Length:956 Species:Mus musculus


Alignment Length:715 Identity:146/715 - (20%)
Similarity:265/715 - (37%) Gaps:199/715 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 KIEC---HQKLLANYRVQFYRPEMSANFED--------LMFYGSPRTAVLVLN-----SEHVLVR 111
            |.||   .:|||..:.:.  :..:|....|        |......:||.::::     |..:|::
Mouse   168 KAECLLNLEKLLRQFLIS--KDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLK 230

  Fly   112 RQVFGVASE--------------------------AGY--FNNSLAWFILGSGRESLPVEQLIDQ 148
            ....|:.|.                          .|:  ||.|.|:|           ::....
Mouse   231 AAELGMVSAYYTYIFTNLEFSLQRMDSLVDDRVNILGFSIFNQSHAFF-----------QEFSQS 284

  Fly   149 LLSGYRMGIDADITVALRGPDNASMLFYD--------VYRISR-----------------QANTP 188
            |...::...|   .|...||..:|.|.:|        |..::|                 |..|.
Mouse   285 LNQSWQENCD---HVPFTGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTS 346

  Fly   189 L-----IIEKKGLWTH--------------------SGGYQKFGNFKNTWVIRR----------- 217
            |     ::|.:||..|                    ..|:|:.|.    |.:..           
Mouse   347 LMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRNGFQQIGQ----WHVAEGLSMDSRLYAS 407

  Fly   218 ---RNFLNVTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPMQRKTYQLF------QLVERM-FN 272
               .:..|.||:.:|:| |.|       ||......|:::...|  |:.|      :|.|.: ||
Mouse   408 NISDSLFNTTLVVTTIL-ENP-------YLMLKGNHQEMEGNDR--YEGFCVDMLKELAEILRFN 462

  Fly   273 LSLAISLTDKWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFR 337
            ..:.:.....:|....||:|:|::|::.:|:||.||..:....:|:..:.:|....|..|..|:|
Mouse   463 YKIRLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYR 527

  Fly   338 -HPRRSHIKNIFFEPLSNQVW-WCVLALVTGSTILLLF-----------HVRLERMLSNMENRFS 389
             |..|......|.:|.|..|| :.:||.:..|.:|.|.           |...:...:.:.|::|
Mouse   528 VHMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYS 592

  Fly   390 F---VWFTMLETYLQQG----PANEIFRLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSESARS 447
            .   :||. :..::|||    |     |..|||.:..:...|:.:::..|.|.:...|..:  |.
Mouse   593 LGNSLWFP-VGGFMQQGSTIAP-----RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ--RM 649

  Fly   448 IVNLQALYD----SNLAIGMENISYNFPIFTNTSNQLVRDVYVKKICKSGEHNIMSLQQGAERII 508
            .|.::::.|    :.:..|..:...:...|.|:..|..:.::.....|.....:.|.::|..|::
Mouse   650 EVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVL 714

  Fly   509 QGRFAFHTAIDRMYRLLLELQMDE---AEFCDLQEV---MFNLPYDSGSVMPKGSPWREHLAHAL 567
            ...:||          |||..|:|   ...|:|.::   :....|..|  ||.||.:|:....|:
Mouse   715 NSNYAF----------LLESTMNEYYRQRNCNLTQIGGLLDTKGYGIG--MPVGSVFRDEFDLAI 767

  Fly   568 LHFRATGLLQYNDKKWMVRRPDCSLFKTSQAE-VDLEHFAPALFALALAMVASALVFLLELFLHW 631
            |..:....|:...:||. ....|...:..:|: :.:|:.......|...::.:..:.:|| || |
Mouse   768 LQLQENNRLEILKRKWW-EGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLE-FL-W 829

  Fly   632  631
            Mouse   830  829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 13/64 (20%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 22/73 (30%)
Lig_chan 353..602 CDD:459656 59/278 (21%)
Grik4NP_780690.2 Periplasmic_Binding_Protein_type1 24..402 CDD:471960 42/253 (17%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 95/400 (24%)
QRL_CxxC_CxxC 863..927 CDD:469521
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

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