DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and grik5

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_002936446.1 Gene:grik5 / 100497490 XenbaseID:XB-GENE-953974 Length:995 Species:Xenopus tropicalis


Alignment Length:686 Identity:149/686 - (21%)
Similarity:263/686 - (38%) Gaps:176/686 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IILTAFLRVLQIESI---NTNFLELAAFE-------DFLRSEHLSHVLVVRGDDADGDWKIECHQ 68
            |:.|....:|.:|.|   .:|.|..:.:.       :||||.::|             |:..|  
 Frog   247 ILTTMDFPLLSLEGIVSDQSNILGFSMYNSSHPFYLEFLRSLNMS-------------WRENC-- 296

  Fly    69 KLLANYRVQFYRPEMSANFEDLMFYGSPRTAVLVLNSEHVLV-------RRQVFGVASEAGYFNN 126
                         |:|.      :.|...:|.|:.::.||:|       |.|..||...:  .:.
 Frog   297 -------------ELST------YLGPALSAALMFDAVHVVVSAVRELNRSQEIGVKQLS--CST 340

  Fly   127 SLAWFILGSGRESLPVEQLIDQLLSGYRM----GIDADITVALRGPDNASMLFYDVYRISRQANT 187
            |..|             |....|::..||    |:...:....:|              .|...|
 Frog   341 SQIW-------------QHGTSLMNYLRMVEYDGLTGRVEFNSKG--------------QRTNYT 378

  Fly   188 PLIIEKKGLWTHSGGYQKFGNFKNTWVIRRRNFLNV--------------TLIGSTVLTEKPPGF 238
            ..|:||.|     .|:::.|    .|...|...:|.              ||:.:|:| |.|...
 Frog   379 LRILEKAG-----DGHREIG----VWYSNRTLAMNATSLDLSTSETLENKTLVVTTIL-ENPYMM 433

  Fly   239 GDMEY--LADDKQ--------LQQLDPMQRKTYQLFQLVERMFNLSLAISLTDKWGELLDNGSWS 293
            ....|  |:.:.|        |.:|..:.|..|:: :|||           ...:|....||||:
 Frog   434 RKSNYRSLSGNDQYEGFCAEMLMELAALLRFNYKI-KLVE-----------DGLYGAPEPNGSWT 486

  Fly   294 GVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFR-HPRRSHIKNIFFEPLSNQVW 357
            |::|::.:|:||.||.......:|:..:.:|....|..|..|:| ...|......|.:|.|..||
 Frog   487 GMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVQMGRKPGYFSFLDPFSPAVW 551

  Fly   358 -WCVLALVTGSTILLLF-----------HVRLERMLSNMENRFSF---VWFTMLETYLQQGPANE 407
             :.:||.:..|.:|.|.           |..|......:||:::.   :||. :..::|||  :|
 Frog   552 LFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERHHILENQYTLGNSLWFP-VGGFMQQG--SE 613

  Fly   408 IF-RLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSESARSIVNLQALYD----SNLAIGMENIS 467
            :. |..|||.:..:...|:.:::..|.|.:...|..:  |..|.:::..|    :|:..|..:..
 Frog   614 VMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ--RMEVPIESADDLADQTNIEYGTIHGG 676

  Fly   468 YNFPIFTNTSNQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFHTAIDRMYRLLLELQMDE 532
            .....|.|:..|..:.::.....|.....:.|.::|..|::..|:||          |||..|:|
 Frog   677 STMTFFQNSRYQTYQRMWNYMNSKQPSVFVKSTEEGIARVLNSRYAF----------LLESTMNE 731

  Fly   533 AE---FCDLQEV---MFNLPYDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCS 591
            ..   .|:|.::   :....|..|  ||.|||:|:.:..|:|..:....|:...:||. ....|.
 Frog   732 YHRRLNCNLTQIGGLLDTKGYGIG--MPLGSPYRDEITLAILQLQENNRLEILKRKWW-EGGKCP 793

  Fly   592 LFKTSQAE-VDLEHFAPALFALALAMVASALVFLLE 626
            ..:..:|: :.:|:.......|...::.:..|.::|
 Frog   794 KEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAIME 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 10/64 (16%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 22/73 (30%)
Lig_chan 353..602 CDD:459656 63/275 (23%)
grik5XP_002936446.1 PBP1_iGluR_Kainate_KA1_2 27..405 CDD:380616 44/229 (19%)
Periplasmic_Binding_Protein_Type_2 418..788 CDD:473866 98/400 (25%)

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