DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and grin2b

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_017948700.2 Gene:grin2b / 100490580 XenbaseID:XB-GENE-949327 Length:1449 Species:Xenopus tropicalis


Alignment Length:735 Identity:131/735 - (17%)
Similarity:247/735 - (33%) Gaps:191/735 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 INTNFLELAAFEDFLRSE--------HLSHVLVVRGDDADGDWKIECHQKLLANYRVQFYRPEMS 84
            :.|.|.....||:.:||.        .|..|:.:.....|.|.||:...|.|.:..:..|..:..
 Frog   167 VTTYFPGYQDFENKVRSTIENSFVGWELEEVIHLDMSLDDNDSKIQNQLKKLQSPVILLYCTKEE 231

  Fly    85 ANFEDLMFYGSPRTAVLVLNSEHVLVRRQVFGVASEAGYFNNSLAWFI---LGSGRESLPVE--- 143
            |.:                          :|.||...|.......|.:   :....:::|.|   
 Frog   232 ATY--------------------------IFEVAHSVGLTGYGYTWIVPSLVAGDTDTVPAEFPT 270

  Fly   144 QLID--------QLLSGYRMGIDADITVALRG--------PDNASMLF-------YDVYRISRQA 185
            .||.        .|.:..|.|| |.||.|...        |.:.|..:       |:.:.:.|..
 Frog   271 GLISVSYDEWDYDLPARVRDGI-AIITTAASTMLSEHNSIPQSKSSCYNIQESRVYEAHMLKRYL 334

  Fly   186 NTPLIIEKKGLWTHSGGYQ-----------------KFGNFKN--------TWVI---------R 216
             ..:..|.:.|.....|||                 :.|.:|:        .|.:         .
 Frog   335 -INVTFEGRNLSFSEDGYQMHPKLVIILLNQQRKWERVGKYKDRSLKMKYYVWPVFELYPNSEEH 398

  Fly   217 RRNFLNVTLIGST--VLTEKPPGFGDMEYLADD---------KQLQQLDPMQRKTYQLFQLVER- 269
            :...|::..:...  |:.|      |::.|:..         ||::    .:.:|.:....::| 
 Frog   399 KDEHLSIVTLEEAPFVIVE------DVDPLSGTCMRNTVPCRKQIR----TENRTEEGGNYIKRC 453

  Fly   270 ----------------MFNLSLAISLTDKWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQ 318
                            .|...|.:....|.|:.: ||:|:|::|:|.::.|..||..:....:|.
 Frog   454 CKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKI-NGTWNGMIGEVVTKRAYMAVGSLTINEERS 517

  Fly   319 PYVQYSAVLHTQNIHFLFRHPRRSHIKNIFFEPLSNQVW--WCVLALVTGSTILLLFH----VRL 377
            ..|.:|.......|..:......:...:.|.||.|..||  ..|:.|:..:..:.:|.    |..
 Frog   518 EVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGY 582

  Fly   378 ERMLSN----------MENRFSFVWFTMLETYLQ-QGPANEIFRLFSTRLLISLSCIFSFMLMQF 431
            .|.|::          :......:|..:....:. |.|...     ::::::|:...|:.:.:..
 Frog   583 NRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGT-----TSKIMVSVWAFFAVIFLAS 642

  Fly   432 YGAFIVGSLLSE------SARSIVNLQALYDSNLAIGMENISYNFPIFTNTSNQL-VRDVYVKKI 489
            |.|.:...::.|      |..|....|...|.:.|       :.|....|.|.:. :|:.|::..
 Frog   643 YTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPA-------FRFGTVPNGSTERNIRNNYLEMH 700

  Fly   490 CKSGEHNIMSLQQGAERIIQGR---FAFHTAIDRMYRLLLELQMDEAEFCDL-----QEVMFNLP 546
            ....:.|..|:|.....:..|:   |.:..|:       |.......|.|.|     .:|.....
 Frog   701 SYMVKFNQRSVQDALLSLKTGKLDAFIYDAAV-------LNYMAGRDEGCKLVTIGSGKVFATTG 758

  Fly   547 YDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAEVDLEHFAPALFA 611
            |  |..:.|.|.|:..:..|:|.....|.::..:..|:.........:...:::|:::.|...:.
 Frog   759 Y--GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYM 821

  Fly   612 LALAMVASALVFLLELFLHW 631
            ||.||..|.:.|::|....|
 Frog   822 LAAAMALSLITFIMEHLFFW 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 8/57 (14%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 19/72 (26%)
Lig_chan 353..602 CDD:459656 47/280 (17%)
grin2bXP_017948700.2 PBP1_iGluR_NMDA_NR2 28..383 CDD:380601 44/243 (18%)
PBP2_iGluR_NMDA_Nr2 400..800 CDD:270436 76/431 (18%)
NMDAR2_C 837..1449 CDD:463148 1/5 (20%)

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