DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and grin3bb

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_017213803.2 Gene:grin3bb / 100333101 ZFINID:ZDB-GENE-131122-77 Length:1114 Species:Danio rerio


Alignment Length:525 Identity:106/525 - (20%)
Similarity:194/525 - (36%) Gaps:108/525 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 LIIEKKGLWTHSGGYQK----FGNFKNTWVIRRRNF-LNVTLIGSTVLTEKPPGF-------GDM 241
            |.:|::|||..|...|:    .|.....|   |..| ::.:.:....|.|.|..|       |:.
Zfish   419 LNVEEQGLWQGSSPRQRTEGQMGREGRRW---RAGFPVSGSRLRVVTLVEHPFVFTREVDEDGNC 480

  Fly   242 ---EYLAD--DKQLQQLDPMQRKTYQ-----------------LFQLVERM-----FNLSLAISL 279
               :|..|  ....:.||.:..:..|                 ...|:|::     |...|.|..
Zfish   481 PAGQYCLDAGTNSSETLDHLYAERAQGNKSFLPPDYSKCCYGYCIDLLEKLSEDMNFEFDLYIVG 545

  Fly   280 TDKWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHI 344
            ..|:| .:..|.|:|::|.:.|..||.||........|...:.:::...:.::..|.|....:..
Zfish   546 DGKYG-AVKGGQWTGLVGDLLSGVADMAVTSFSINSARSKVIDFTSPFFSTSLGILVRSKDTAAP 609

  Fly   345 KNIFFEPLSNQVWWCV-LALVTGSTILLLFHVRLE-RMLSNMENR---FSF-----VWFTML--E 397
            ...|..||...:|..: :||...:..|.|:..:.. .|..:..||   ||:     :.:.:|  .
Zfish   610 IGAFMWPLHWSMWMGIFVALHITALFLTLYEWKSPFGMTPHGRNRVKVFSYSSALNLCYAILFGR 674

  Fly   398 TYLQQGPANEIFRLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSESARSIVNLQALYDSNLAIG 462
            |...:.|     :.::.|.|::|..||..:::..|.|.:...::.|  ::...:..::|:.|...
Zfish   675 TVSSKTP-----KCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGE--KTFEEVSGIHDAKLHHP 732

  Fly   463 MENISYNFPIFTNTSNQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFHTAIDR------- 520
            .:...:      .|..:...:.|:||.... .|..|.           :|...|..|.       
Zfish   733 SQGFRF------GTVRESSAEDYMKKSFPE-MHEYMR-----------KFNEPTTPDGVATLKTD 779

  Fly   521 --------MYRLLLELQMDEAEFCDLQEVMFNLPY---DSGSVMPKGSPWREHLAHALLHFRATG 574
                    |.:.||:.::.....|.|..|  ..|:   ..|..:|:.||...:::..:..:::.|
Zfish   780 PPQLDAFIMDKALLDYEVSIDADCKLLTV--GKPFAIEGYGIGLPQNSPLTSNISEFVSRYKSDG 842

  Fly   575 LLQYNDKKWMVRRPDCS--LFK-TSQAEVDLEHFAPALFALALAMVASALVFLL---ELFLHWLP 633
            .:.....||....| |.  :|. |...::.:.||: .||.|....|..||:.|.   ..:...||
Zfish   843 YMDMLHDKWYKVVP-CGKRVFAVTETLQMGIRHFS-GLFVLLCVGVTGALLTLAGEHAFYRLVLP 905

  Fly   634 DFRRR 638
            ..||:
Zfish   906 HIRRK 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 17/72 (24%)
Lig_chan 353..602 CDD:459656 50/281 (18%)
grin3bbXP_017213803.2 Periplasmic_Binding_Protein_type1 39..427 CDD:471960 3/7 (43%)
PBP2_iGluR_NMDA_Nr3 457..852 CDD:270438 77/422 (18%)
Lig_chan 618..885 CDD:459656 55/295 (19%)
Blue background indicates that the domain is not in the aligned region.

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