DRSC/TRiP Functional Genomics Resources

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Protein Alignment thw and js

DIOPT Version :10

Sequence 1:NP_001097699.2 Gene:thw / 40868 FlyBaseID:FBgn0037487 Length:1137 Species:Drosophila melanogaster
Sequence 2:NP_650538.1 Gene:js / 41986 FlyBaseID:FBgn0038422 Length:637 Species:Drosophila melanogaster


Alignment Length:744 Identity:174/744 - (23%)
Similarity:265/744 - (35%) Gaps:224/744 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 IPKTSFSCRSYGNGYFADMETDCQVFHICEE-GRKISFLCPNGTIFQQSELTCDWWFKVNCLGSS 168
            |.||||||.....||:||:||.|||:|:|:. ||:.|:.|||.|:|||..|.||.|:.|||..:.
  Fly    44 IQKTSFSCAGRPAGYYADVETGCQVYHMCDGLGRQFSYTCPNTTLFQQRMLICDHWYMVNCSKAE 108

  Fly   169 GYYAESAEILNKQRVHRVRPSVPVQGFNIVGGGLNIKPKVTPVAGQGRSAAPRANPDRRIDSTED 233
            ..||  |.:|..||                     .||.|.......|:  ||  ||     ..|
  Fly   109 SNYA--ANLLIGQR---------------------DKPFVNDEENSLRT--PR--PD-----LLD 141

  Fly   234 VPASVESVDFDDVSGEKQRKVLPSIDNNSNDQESQITAESSSFVSGSGKRRTNKESN-------- 290
            .|.:      .|.|||..|.......:|.|    ||..||   |.|:|..:::.:.:        
  Fly   142 RPYA------PDYSGESFRSQYKQFTSNQN----QIRDES---VKGAGAGKSDPQISQTRWRIPP 193

  Fly   291 PNRNDDITVLKP-------------ARLRTPVATQERGVSTERARNGQRGQHRYSGSEEHSKERE 342
            |:|    |:|.|             |:.|.|:.|..  .:|.||....|.......:...:..|.
  Fly   194 PSR----TILPPAYEPQIELPSAQSAKPRIPIITST--TTTTRATTTTRPTTTTRATTTTTTTRR 252

  Fly   343 RPTPGQSKE-----KPEFFE--------AHSTRSVPQTTAHYSTGSHSTVRRLEPS--KSTPFYT 392
            .|...:.||     :|.|.|        :||||.  .|:|.::: :.|.:|..:.|  |.|.|..
  Fly   253 PPVTARPKEALHNRRPNFQEHDMDDLGTSHSTRY--NTSADFNS-AESPLRETKQSSTKLTKFIK 314

  Fly   393 PTVPSLVKSKSTEGKLNY---------IKGGHVATT----------PNPHRFGSASSGIFIESSV 438
            |      .||..|....|         .:...||||          |.|.|...::      ::.
  Fly   315 P------PSKIYEPPFVYPIYNLEESQTQNAAVATTLRTSTAAPFSPVPSRKEVST------TTP 367

  Fly   439 APKVKPTASASIELDSTFKPVIIGMRHHYDVASSGEFRPPSKSTESRDYLPTTPSPSAASSGPTY 503
            .|..:||..|.:...|...|..:..   ..|....:.|.|:.:...|  |.|..|.:|..|.|..
  Fly   368 RPLSRPTTLAGVPFSSATHPTTVTT---VGVPPRSDNRTPAPAQSFR--LATPTSTAAPPSRPAQ 427

  Fly   504 LPMSGKSPRVNTGGAAGEDVLLFAPNPVKEESVFRNVQDMLKTMNLLKDQFEDVELNAAAAAPAR 568
            ||.:...|          ..:.|.|:            |:..|..  ...:.:.::.:....|.:
  Fly   428 LPFNDLLP----------PFVDFVPH------------DIATTQG--PPIYYEWKVPSNGLEPPK 468

  Fly   569 V-------GLEIPPSSGPDALVSFAKYFAQEHNETINSLSKKDK-----SEKVDKTGVQTKLSVK 621
            :       |.|.|.::|...:.|....|    |..:|.:....|     :..:.::....:|::.
  Fly   469 LDPPIGVDGREYPETTGDYGVTSKQDVF----NTRLNDIGSHQKKPVQITSPLQQSSTSHRLAIS 529

  Fly   622 PPLPTIKPSDTTALLTTSENPPAISDNADDIKKSLLSDTTVKKYSNLFGL----KSAQGRGAGES 682
               .:|||.:.........:..|.|.:...::|..|    :.:|:  |.|    ::..|.|||.:
  Fly   530 ---RSIKPKEEQESAQRRSDVVASSTDISHLRKQFL----IPEYA--FPLETIGRTGYGPGAGAA 585

  Fly   683 DISSGLLSNQTNGTQSEAGSKYQQYPQIGSTGSTIGALAEKPETRKIAQIFSNALSSYLDNPATF 747
                      ..|:.|..|..|..:.            .:.||.|  |:.|.       :||.. 
  Fly   586 ----------AGGSGSSNGDLYNSFQ------------LKIPEQR--AKWFG-------ENPKC- 618

  Fly   748 RAELAARARPTEPPSTPNFKPVTTTDPSL 776
                        |...|:|....|.:|.|
  Fly   619 ------------PECHPSFVLPGTCEPCL 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thwNP_001097699.2 CBM_14 112..164 CDD:426342 27/52 (52%)
jsNP_650538.1 CBM_14 51..104 CDD:426342 27/52 (52%)
PHA03247 <192..481 CDD:223021 70/338 (21%)

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