DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2656 and Gpn3

DIOPT Version :9

Sequence 1:NP_649699.1 Gene:CG2656 / 40857 FlyBaseID:FBgn0037478 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_973720.2 Gene:Gpn3 / 360810 RGDID:1303034 Length:284 Species:Rattus norvegicus


Alignment Length:282 Identity:148/282 - (52%)
Similarity:202/282 - (71%) Gaps:15/282 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RFAQIIVGPAGSGKSTYCSLMQQYAMDCKRNVQVVNLDPAAEHFTYNPLTDIRDLIHLDDAMEDE 66
            |:||:::||||||||||||.|.|:.....|:|||||||||||||.|..:.|||:||.:||.|||:
  Rat     3 RYAQLVMGPAGSGKSTYCSTMVQHCEALNRSVQVVNLDPAAEHFNYPVMADIRELIEVDDVMEDD 67

  Fly    67 ELHYGPNGGLIFCLEFLIENQEWLKEQLCGGENELMVGEPDDDYILFDMPGQIELFTHLKMGRQL 131
            .|.:||||||:||:|:...|.:||         |..:|..:|||||||.||||||:|||.:.:||
  Rat    68 SLRFGPNGGLVFCMEYFANNFDWL---------ENCLGHVEDDYILFDCPGQIELYTHLPVMKQL 123

  Fly   132 VELLESWNFRTCVVFCLDSQFMVDGAKFISGTMAALSVMANMEQPHINVLTKVDLLSSDARKQLE 196
            |:.||.|.||.|.||.:||||||:..|||||.:||||.|.::|.|.:|::||:||||..|:|::|
  Rat   124 VQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIE 188

  Fly   197 MYLEPDAHSLMGELTIGTGFGEKYAKLTQAIGALIEDFSLVRFFPLDSQDEESVGDLLLQIDSIL 261
            .:|:||.:||:.:.| |....:|:.|||:|:..|::|:|:|||.|.|..||||:..:|..||..:
  Rat   189 KFLDPDMYSLLEDST-GDLRSQKFKKLTKAVCGLVDDYSMVRFLPYDQSDEESMNIVLQHIDFAI 252

  Fly   262 QYGEDADVNVKDFDEPEEGDQD 283
            |||||.     :|.||:|.:::
  Rat   253 QYGEDL-----EFKEPKEHEEE 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2656NP_649699.1 Gem1 2..196 CDD:224025 111/193 (58%)
ATP_bind_1 7..263 CDD:281079 136/255 (53%)
Gpn3NP_973720.2 GPN3 4..249 CDD:349781 136/254 (54%)
Gly-Pro-Asn (GPN)-loop, involved in dimer interface. /evidence=ECO:0000250|UniProtKB:Q9UYR9 72..74 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..284 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354390
Domainoid 1 1.000 282 1.000 Domainoid score I1584
eggNOG 1 0.900 - - E1_KOG1534
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6487
Inparanoid 1 1.050 301 1.000 Inparanoid score I2602
OMA 1 1.010 - - QHG53962
OrthoDB 1 1.010 - - D432496at33208
OrthoFinder 1 1.000 - - FOG0004799
OrthoInspector 1 1.000 - - oto98154
orthoMCL 1 0.900 - - OOG6_102080
Panther 1 1.100 - - LDO PTHR21231
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3381
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

Return to query results.
Submit another query.