DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Mlp84B and WLIM2b

Sequence 1:NP_001303418.1 Gene:Mlp84B FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001190099.1 Gene:WLIM2b AraportID:AT3G55770 Length:233 Species:Arabidopsis thaliana

Alignment Length:217 Identity:59/218 (27%)
Similarity:79/218 (36%) Gaps:69/218 (32%)


  Fly    11 KCPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYCKTCHGRKFGPKGYGF 75
            ||..|.|:|||.|...|.|..:||:||||..|...|..::.:..|..||||....:.|...|   
plant     9 KCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKESG--- 70

  Fly    76 GTGAGTLSMDNGSQFLRENGD--VPSVRNGARLEPRAIARAPEG--EGCPRCGGYVYAAEQM--- 133
                   |.:...|...::.|  .|.:..    .|..:|....|  |.|..|...||..|::   
plant    71 -------SFNKNFQSPAKSADKSTPELTR----TPSRVAGRFSGTQEKCATCSKTVYPIEKIHNP 124

  Fly   134 -----LAR--------------------------GRSWHKECFKC--GTCK------KGLDSILC 159
                 |||                          .:::||.||||  |.|.      ..|:.|| 
plant   125 LSYRELARKPNVLHRCIDPGDIGSCYFNLHVTVESQTYHKSCFKCSHGGCPISPSNYAALEGIL- 188

  Fly   160 CEAPDKNIYCKGCYAKKFGPKG 181
                    |||..:|:.|..||
plant   189 --------YCKHHFAQLFKEKG 202

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788 23/53 (43%)
LIM_CRP_like 120..173 CDD:188712 22/95 (23%)
LIM_CRP_like 222..275 CDD:188712
LIM_CRP_like 325..378 CDD:188712
LIM_CRP_like 421..474 CDD:188712
WLIM2bNP_001190099.1 LIM1_SF3 6..68 CDD:188824 24/59 (41%)
LIM 108..202 CDD:295319 25/103 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 1 1.000 T32246
orthoMCL 1 0.900 OOG5_128738
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
21.900

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