DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Mlp84B and Crip2

Sequence 1:NP_001303418.1 Gene:Mlp84B FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_077185.1 Gene:Crip2 MGIID:1915587 Length:208 Species:Mus musculus

Alignment Length:216 Identity:75/217 (35%)
Similarity:100/217 (46%) Gaps:43/217 (20%)


  Fly     9 APKCPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYC-KTCHGRKFGPKG 72
            |.|||:|.|:||.||:..:.|..:||.|.||..|||:|......||:.:.:| |.|:...|||||
Mouse     2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCNKTLTPGGHAEHDGKPFCHKPCYATLFGPKG 66

  Fly    73 YGFGTGAGTLSMDN-GSQFLRENG--DVPSVRNGARLEPRAIARAPEGEG--------------C 120
            ...| |||:...:. .::..:..|  :||.||.    |.|..:..|:|..              |
Mouse    67 VNIG-GAGSYIYEKPQTEAPQVTGPIEVPVVRT----EERKTSGPPKGPSKASSVTTFTGEPNMC 126

  Fly   121 PRCGGYVYAAEQMLARGRSWHKECFKCGTCKKGLDSILCCEAP------DKNIYC-KGCYAKKFG 178
            |||...||.||::.:.|:.||:.|.:|..|.|.|       .|      |...|| |.||...||
Mouse   127 PRCNKRVYFAEKVTSLGKDWHRPCLRCERCSKTL-------TPGGHAEHDGQPYCHKPCYGILFG 184

  Fly   179 PKGYGYGQGGGALQSDCYAHD 199
            |||...|..|.      |.:|
Mouse   185 PKGVNTGAVGS------YIYD 199

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788 24/54 (44%)
LIM_CRP_like 120..173 CDD:188712 22/60 (37%)
LIM_CRP_like 222..275 CDD:188712
LIM_CRP_like 325..378 CDD:188712
LIM_CRP_like 421..474 CDD:188712
Crip2NP_077185.1 LIM1_TLP 5..58 CDD:188860 23/53 (43%)
LIM1_TLP 126..179 CDD:188860 22/60 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1214165at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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