Protein Alignment ftz and hoxa4a

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_571610.1
• Gene: hoxa4a / 58050
• ZFINID: ZDB-GENE-000823-4
• Length: 245
• Species: Danio rerio
• Alignment Length: 275
• Identity: 87/275 - (31%)
• Similarity: 118/275 - (42%)
• Gaps: 81/275 - (29%)

  Fly   122 YTP---DYFYTTVEQVKKAPAVSTKVTAS-PAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQK 182
            |.|   ||:     :..|.|.......|| |..:|.::.......|.::..|:.|.:..|.|:..
Zfish    28 YMPVSSDYY-----ERPKDPGFPHHEEASYPRSNYQEQSYDYGNVSTNDLNDFSDRHHAQPQSVS 87

  Fly   183 LKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAV------SQEINHRIVTAPNGAGDFNWS 241
            ..:|    |..||.:.:          .|.|.|..|.|      ||:....:|        :.|.
Zfish    88 QNHG----PRLTTESCV----------GSDGNKDCSLVSDALPGSQKSKEPVV--------YPWM 130

  Fly   242 ---HIEETLASDCKD-SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWF 302
               |:....||.... .||:|..|||.|.||||||||||||:|||||::||:.:.|||||:||||
Zfish   131 KKVHVNTVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWF 195

  Fly   303 QNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYSHSH 367
            ||||||.|||..|.::             .:.::|:|         |..||.:|.|.
Zfish   196 QNRRMKWKKDHKLPNT-------------KIRSSSSA---------PSNHHVKTDAT-------- 230

  Fly   368 SHGYGLLNDYPQQQT 382
                      .||||
Zfish   231 ----------QQQQT 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	29/138 (21%)
		Homeodomain	255..311	CDD:459649	41/55 (75%)
		KLF1_2_4_N	<321..404	CDD:425360	11/62 (18%)
hoxa4a	NP_571610.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	34..99		17/73 (23%)
		Antp-type hexapeptide	126..131		2/12 (17%)
		Homeodomain	148..204	CDD:459649	41/55 (75%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	205..245		13/71 (18%)