Protein Alignment ftz and Hoxa7

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001102703.2
• Gene: Hoxa7 / 500126
• RGDID: 1587253
• Length: 229
• Species: Rattus norvegicus
• Alignment Length: 236
• Identity: 83/236 - (35%)
• Similarity: 108/236 - (45%)
• Gaps: 65/236 - (27%)

  Fly   139 AVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKL--KNGDFATPPPTTPTSLPP 201
            |:.:|.||..:...:.|    ||..:         ::|.||....  ..|.||       :::|.
  Rat     9 ALFSKYTAGASLFQNAE----PTSCS---------FAPNSQRSGYGPGAGAFA-------SNVPG 53

  Fly   202 LEGISTP-PQSPGEKS-----------SSAVSQEINHRIVTAPNGAGD----------------- 237
            |..:::| .|:|...|           .::..|.|.........||.|
  Rat    54 LYNVNSPLYQNPFASSYGLGADAYNLPCASYDQNIPGLCSDLAKGACDKADEGVLHGPAEASFRI 118

  Fly   238 FNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWF 302
            :.|      :.|...|.||.|||||||||||||||||||||:||||||:||:||.|:||||||||
  Rat   119 YPW------MRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177

  Fly   303 QNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGA 343
            ||||||.||        ||..........|.:|..:.:|.|
  Rat   178 QNRRMKWKK--------EHKDESQAPTAVPEDAVPSVSTAA 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	25/139 (18%)
		Homeodomain	255..311	CDD:459649	48/55 (87%)
		KLF1_2_4_N	<321..404	CDD:425360	5/23 (22%)
Hoxa7	NP_001102703.2	Homeodomain	130..186	CDD:459649	48/55 (87%)