DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and LOC1281556

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_061500013.1 Gene:LOC1281556 / 1281556 VectorBaseID:AGAMI1_000208 Length:433 Species:Anopheles gambiae


Alignment Length:386 Identity:84/386 - (21%)
Similarity:130/386 - (33%) Gaps:98/386 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SYADNMN-MYNMYHPHS-----LPPTYYDNSGSNAYYQNTSNYQG-YYPQESYSESCYYYNNQEQ 68
            ||:..:| :.::..||:     ||.:.....||:|..::....|. ..|..|::.|........:
Mosquito    87 SYSVRLNRLQSLSPPHNYSITRLPESPQSLEGSHASVRSLEALQSRLSPPVSHTVSPGAVPLSLK 151

  Fly    69 VTTQTVPPVQPTTPPPKATKRKAEDDAASIIA--------------AVEERPSTLRALLTNPVKK 119
            ....:.|||.|..|||          |..::.              |....|..:..|....|:.
Mosquito   152 RPRSSSPPVSPPPPPP----------ATGVVGLGGGPQGGGGPVPPAHPAGPIVVPGLPPGLVRP 206

  Fly   120 LKYTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVP----TPSASEDVDYLDVYSPQSQT 180
            ...:|.         :.||.........|.|    |..::|    ||...:........:.|.|.
Mosquito   207 FPVSPS---------QHAPGAHPAQPGGPQP----ELKSLPPFLHTPEMVQAAHNQHFLAAQFQA 258

  Fly   181 QKLKNGDFATPPPTTPT-------SLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDF 238
            ..|.:.....|.|..|.       ::||.:.....|.                  :.:.:|.|.|
Mosquito   259 AALAHAQAGQPFPPHPAAAHLHNPNMPPRDSYPLYPW------------------LLSRHGRGVF 305

  Fly   239 NWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQ 303
            ........|. ..:.|||.|..::..|.|:||..|..|.|:....|..:|..|:|||.|:|:|||
Mosquito   306 PIGFPGNYLI-PFRKSKRVRTAFSPSQLLKLEHAFESNHYVVGAERKQLAQNLNLSETQVKVWFQ 369

  Fly   304 NRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYS 364
            |||.|.|:     ...|..|:|          :..:|.|         .|...:|:.|..|
Mosquito   370 NRRTKHKR-----MQQEEGGSG----------SGKSTDG---------DHQNRSASSPTGS 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 47/268 (18%)
Homeodomain 255..311 CDD:459649 25/55 (45%)
KLF1_2_4_N <321..404 CDD:425360 8/44 (18%)
LOC1281556XP_061500013.1 None

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