DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxb5b

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:329 Identity:106/329 - (32%)
Similarity:142/329 - (43%) Gaps:97/329 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 SSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGG 192
            ||.:.|    |....:|:...:|.|.|                 .|||...|:...:||...|..
Zfish     2 SSYFLN----SFSGRYPNGSDYQLLNY-----------------GTNGAMNASYRDSTSMHSGSF 45

  Fly   193 G---SGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTE---- 250
            |   :|..|   :|....||::|..|............|..:..|......| ||.|::::    
Zfish    46 GYNYNGIDL---SVNRPNNGHFGAVGDNSRAFQNPSQETRYRQSSCSLSSPD-PLSCATSDTLEL 106

  Fly   251 ----PPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSP 311
                ||:                 :::.|.|                  |..::..:.|   .|.
Zfish   107 KGSSPPS-----------------DQSTPTG------------------NSRLTNSNNL---TSS 133

  Fly   312 DELGSNDNDDDLGDSDSDEDLMAETT-----------------DGER-IIYPWMKKIHVAGVANG 358
            :.....|.|:....|:::|.....||                 ||:. .|:|||:|:|::     
Zfish   134 NSTHFADTDETNVSSETEEGAQTTTTSRTQKQESVATSTTTPNDGQTPQIFPWMRKLHIS----- 193

  Fly   359 SYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 423
            ....|.:.||.||||||:|.||||||||:||||||||||||||.|.|||||||||||||||||||
Zfish   194 HDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 258

  Fly   424 DNKL 427
            ||||
Zfish   259 DNKL 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 49/55 (89%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 23/157 (15%)
Antp-type hexapeptide 183..188 3/4 (75%)
Homeodomain 202..258 CDD:459649 49/55 (89%)

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