DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and LOC5667524

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_001688960.3 Gene:LOC5667524 / 5667524 VectorBaseID:AGAMI1_007929 Length:548 Species:Anopheles gambiae


Alignment Length:605 Identity:138/605 - (22%)
Similarity:202/605 - (33%) Gaps:218/605 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YPHAPHHVQSPMSMGNGLDPKFPPLADDYHHYNGHYSMTASTGHMSGA--------VGGGAGVGS 64
            |.|| .|:.||.::..|:.....|..|.|...:...::.....|.:.|        :....|:  
Mosquito    97 YVHA-SHLYSPSAIEYGITTSSSPPTDLYFEADSQSAIYYGPSHPTPAAPFQENRIISADNGL-- 158

  Fly    65 VGGGGAGGMTGHPHSM-HPADMVSD--YMAHHH------------------------NPHSHS-- 100
                   ..|...::| |.|...:|  |:|||.                        :||.|:  
Mosquito   159 -------SYTNLDYAMYHQAQECADPSYLAHHQDNKLHLHRFGAFPGAVASDATVDGDPHHHNLL 216

  Fly   101 HSHTHSLPHHHSNSAISGHHQASAGG--YSSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFI 163
            |.|:| :.|.||:::.:..|   .||  :...|::..|.|.         ||.|           
Mosquito   217 HQHSH-ISHQHSSTSPNDAH---GGGATWGQVYSDNIPQSQ---------HQQL----------- 257

  Fly   164 SAGAVHSDPT-NGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGS 227
                   .|: |.:..|...||.|:        |:|....|..||:      ....|.:||||.:
Mosquito   258 -------QPSLNQHTVAQCSPNVSS--------ALLDSPHVILSAS------VSDDGDSNGSVAN 301

  Fly   228 T----HSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLR 288
            :    |...|.||.......||                     :....:..||.||.|:...:.:
Mosquito   302 SFSRLHQHHHHPHHHHHHATLQ---------------------QNMQAQQHPANQQSQQQTQQQQ 345

  Fly   289 CDDMGS--ENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTD----GERIIYPWM 347
            ......  :|...:...:.|      ::..|.....|..|     |...||.    ...::.|..
Mosquito   346 QQQHAQQPQNQQNAPTYKWM------QVKRNVPKPPLTKS-----LQLSTTPEYHIPTHVLDPLR 399

  Fly   348 KKIHVAGVANGSYQPGMEP------KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLS 406
            ...|...||..:..|....      ...||.:|..|:.|||||||:|:||||.||||||:.|.|:
Mosquito   400 VPNHTTVVAPSAVSPHQSSFMINNNSTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANALHLN 464

  Fly   407 ERQIKIWFQNRRMKWKKDNK----LPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQ 467
            |.|:||||||||||.||..|    .|..:|                                   
Mosquito   465 ETQVKIWFQNRRMKQKKRVKEGLIPPEIQN----------------------------------- 494

  Fly   468 QSQQQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPETTSSYPGSQQHLSNNNNNGSGN 532
                    |:|..:..|.|:...|   .|||......||:|...:::                  
Mosquito   495 --------QSPKHSSLINSNDSSS---ASSSTATLTAIPSASGASAT------------------ 530

  Fly   533 NNNNNNNNNSNLNNNNNNNQ 552
                   |.|.||.:|.|::
Mosquito   531 -------NTSTLNESNENSR 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 36/55 (65%)
LOC5667524XP_001688960.3 None

Return to query results.
Submit another query.