DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and lbl

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster


Alignment Length:248 Identity:68/248 - (27%)
Similarity:101/248 - (40%) Gaps:54/248 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 QELGLKLEKRIEEAVPAGQQL------------QELGMRLRCDDMGSEN--------------DD 298
            |.|....:::::|...|..||            .|.|...|.....|.|              :.
  Fly   125 QRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEK 189

  Fly   299 MSEEDRLML-DRSPDE--LGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSY 360
            .|:|||:.: .:||:|  .|::.:.   ||:..|......|.:.:....|....|         :
  Fly   190 RSQEDRMEVPKKSPEEQPKGASKSS---GDTPLDALFQLSTKNFDEEQDPATLNI---------F 242

  Fly   361 QPGMEPKRQ---RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 422
            .....||::   |||:|..||.||||.|.|.:||:...|.|||..|.||..|:..||||||.|.|
  Fly   243 ATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLK 307

  Fly   423 KDNKLPNTKNVR-KKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQT 474
            :|.: ...|:|: :|..|.:.:|        .|:........||.|.....|:
  Fly   308 RDME-ELKKDVQCEKIPDQSADP--------NRSHHNHPHYHQQHQHYAHMQS 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 30/58 (52%)
lblNP_001262805.1 COG5576 206..332 CDD:227863 45/146 (31%)
Homeodomain 252..308 CDD:459649 29/55 (53%)

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