Protein Alignment Dfd and msx2

DIOPT Version :10

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: XP_002936749.1
• Gene: msx2 / 394987
• XenbaseID: XB-GENE-852974
• Length: 256
• Species: Xenopus tropicalis
• Alignment Length: 225
• Identity: 54/225 - (24%)
• Similarity: 81/225 - (36%)
• Gaps: 77/225 - (34%)

  Fly   223 GSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVP---------AGQ 278
            |.|..|.|.......::..||....:               |..:||:.:..|         ||.
 Frog    17 GQVHPTLSPSDDHKIKVSSLPFSVEA---------------LMADKRVPKEAPHLRGVDASAAGS 66

  Fly   279 QLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELG-SNDNDDDLGDSDSDEDLMAETTDGERI 342
            ..:.|.|.:|                    .||...| :...:.....|::.||....:.||
 Frog    67 TPRHLHMGIR--------------------DSPSPPGLTKTFETSSVKSENSEDGTTWSKDG--- 108

  Fly   343 IYPWMKKIHVAGVANGSYQP---GMEP-----------KRQRTAYTRHQILELEKEFHYNRYLTR 393
                           |||.|   .:.|           ::.||.:|..|:|.||::|...:||:.
 Frog   109 ---------------GSYSPPPRHLSPSTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSI 158

  Fly   394 RRRIEIAHTLVLSERQIKIWFQNRRMKWKK 423
            ..|.|.:.:|.|:|.|:||||||||.|.|:
 Frog   159 AERAEFSSSLNLTETQVKIWFQNRRAKAKR 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	25/55 (45%)
msx2	XP_002936749.1	Homeodomain	132..188	CDD:459649	25/55 (45%)