Protein Alignment Dfd and Hoxd12

DIOPT Version :10

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001178832.1
• Gene: Hoxd12 / 366082
• RGDID: 1309797
• Length: 268
• Species: Rattus norvegicus
• Alignment Length: 236
• Identity: 65/236 - (27%)
• Similarity: 94/236 - (39%)
• Gaps: 70/236 - (29%)

  Fly   211 YGGYGGGYGTANGSVGSTHSQG--HSPHSQM-------MDLPLQCSSTEPPTNTALGLQELGLKL 266
            :||:...|.|.:|.:| ..|.|  ..|..|:       .....:.|.|.||......|....||.
  Rat    69 FGGFSQPYLTGSGPIG-LQSPGTKDGPEDQVKFYTPDAATASEERSRTRPPFAPESSLVHSALKG 132

  Fly   267 EK----RIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSD 327
            .|    .:..|.|....|                          |..:|  ..||..:|..|..:
  Rat   133 TKYDFAGVGRAAPGSVTL--------------------------LQGAP--CASNFKEDTKGPLN 169

  Fly   328 SDEDLMAETTDGERIIYPWMKKIHVAGVAN---GSYQPGM-------EPKRQRTAYTRHQILELE 382
            .:   ||               :.|||||:   .|...|:       ..:::|..||:.||.|||
  Rat   170 LN---MA---------------VQVAGVASCLRSSLPDGLPWGAAPGRARKKRKPYTKQQIAELE 216

  Fly   383 KEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 423
            .||..|.::.|::|.|:::.|.||::|:||||||||||.|:
  Rat   217 NEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKR 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	28/55 (51%)
Hoxd12	NP_001178832.1	Homeodomain	201..257	CDD:459649	28/55 (51%)