Protein Alignment Dfd and Hmx1

DIOPT Version :10

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001101833.2
• Gene: Hmx1 / 360960
• RGDID: 1304928
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 291
• Identity: 74/291 - (25%)
• Similarity: 104/291 - (35%)
• Gaps: 104/291 - (35%)

  Fly   187 NGGGGGGSGAVLGGG-----------AVG-GSANGYY----GGYGGGYGTANGSVGSTHSQGHSP 235
            :|.||......||.|           |:| |.|..:|    ||||||.               ||
  Rat    75 SGPGGEARARALGLGPRPPPGPGPPFALGCGGATRWYPRAQGGYGGGL---------------SP 124

  Fly   236 HSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMS 300
            .:...|        .|.|...:|          |.|.|.|            ||...|:...:::
  Rat   125 DTSDRD--------SPETGEDMG----------RAESAWP------------RCPGPGAVPREVT 159

  Fly   301 EEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGME 365
            .:                     |.:...|: .||..:...          ||..|.|..:.|..
  Rat   160 TQ---------------------GPAAGGEE-AAELAEAPA----------VAAAAAGEARGGRR 192

  Fly   366 PKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKL--- 427
             |:.||.::|.|:.:||..|...|||:...|..:|.:|.|:|.|:||||||||.|||:....
  Rat   193 -KKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELE 256

  Fly   428 ------PNTKNVRKKTVDANGNPTPVAKKPT 452
                  |..:.:.:..|..:.:| |.|..||
  Rat   257 AASLSPPGAQRLVRVPVLYHESP-PAATGPT 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	27/55 (49%)
Hmx1	NP_001101833.2	Homeodomain	193..249	CDD:459649	27/55 (49%)