Protein Alignment Dfd and cad

DIOPT Version :10

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Alignment Length: 514
• Identity: 128/514 - (24%)
• Similarity: 185/514 - (35%)
• Gaps: 164/514 - (31%)

  Fly    37 HHYNG-HYSMTASTGHMSGAVGGGAGVGSVGGGGAGGMTGHPHSMHP-----ADMVSDYMAHH-- 93
            |:||. .|:...|..:::.|...|.         ....|.:.|...|     .|:.|.:.|||
  Fly     4 HYYNTLPYTQKHSAANLAYASAAGQ---------PWNWTPNYHHTPPNHQFLGDVDSSHAAHHAA 59

  Fly    94 --HNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANATPPS-----HPHSHPHAHPHQS 151
              |..:.:||...||     :.:|.:|...:.|...:.|:....|.|     ..|.|.|||...|
  Fly    60 AAHQMYYNSHHMFHS-----AAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSS 119

  Fly   152 LGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGG 216
            ..          |:|:..|....| .|..|..|:|.|.||.|     |||.|||:.:|
  Fly   120 SA----------SSGSSSSGGAPG-APQLNETNSSIGVGGAG-----GGGGVGGATDG------- 161

  Fly   217 GYGTANGSVGSTHSQGH------SPHSQMMDLPLQCSSTE-----PPTNTALGLQELGLKLEKRI 270
                ..||....|.| |      ||       |:..|.:|     .||:.:.....|...|..
  Fly   162 ----GPGSAPPNHQQ-HIAEGLPSP-------PITVSGSEISSPGAPTSASSPHHHLAHHLSA-- 212

  Fly   271 EEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAE 335
                                 :.:.|::.:..     :.||....:|:|::.:.:::       .
  Fly   213 ---------------------VANNNNNNNNN-----NNSPSTHNNNNNNNSVSNNN-------R 244

  Fly   336 TTDGERIIYPWMKK--IHVAGVANGSYQPGME--------------PKRQRTAYTRHQILELEKE 384
            |:..:...:.||||  .......:.|..|.:|              ..:.|..||..|.||||||
  Fly   245 TSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKE 309

  Fly   385 FHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVR---------KKTVDA 440
            :..:||:|.||:.|:|.||.|||||:||||||||.|.:|.||..:..||.         .:.:||
  Fly   310 YCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDA 374

  Fly   441 NG----------------NPTPVAKKPTKR-------------AASKKQQQAQQQQQSQ 470
            ..                ||......|..|             |.:....|.|||..:|
  Fly   375 KAKLEPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHSHSLAAVAAHSHQLQQQHSAQ 433

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	33/55 (60%)
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	33/54 (61%)