DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and HOXA1

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_005513.2 Gene:HOXA1 / 3198 HGNCID:5099 Length:335 Species:Homo sapiens


Alignment Length:409 Identity:101/409 - (24%)
Similarity:135/409 - (33%) Gaps:164/409 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SVGGG-----GAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQAS 123
            |.||.     |.|...|.||.            |||:.|.|....|:..   ..|..:|..|.:.
Human    46 SCGGDDRFLVGRGVQIGSPHH------------HHHHHHRHPQPATYQT---SGNLGVSYSHSSC 95

  Fly   124 AGGYSSNYANATPPSHPHSHPHAHPHQS--LGYYVHHAPEFISAG-----AVHSDPTNGYGPAAN 181
            ...|.|...:|     |:| |:|...::  .|.|...||...|..     ..|.....||     
Human    96 GPSYGSQNFSA-----PYS-PYALNQEADVSGGYPQCAPAVYSGNLSSPMVQHHHHHQGY----- 149

  Fly   182 VPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGY-----GTANGSVGSTHSQGHSPHSQMMD 241
                             .|||| ||....:..||..:     .|.|.|:    |..|:.|.:...
Human   150 -----------------AGGAV-GSPQYIHHSYGQEHQSLALATYNNSL----SPLHASHQEACR 192

  Fly   242 LPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLM 306
            .|  .|.|..|..|.                                              |.:.
Human   193 SP--ASETSSPAQTF----------------------------------------------DWMK 209

  Fly   307 LDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRT 371
            :.|:|.:.|                                 |:       |.|....:|...||
Human   210 VKRNPPKTG---------------------------------KV-------GEYGYLGQPNAVRT 234

  Fly   372 AYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK---LP----- 428
            .:|..|:.|||||||:|:||||.||:|||.:|.|:|.|:||||||||||.||..|   ||     
Human   235 NFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPAT 299

  Fly   429 ---NTKNVRKKTVDANGNP 444
               |.:...:.:..::.:|
Human   300 PPGNDEKAEESSEKSSSSP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 35/55 (64%)
HOXA1NP_005513.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..80 8/30 (27%)
Interaction with OGT. /evidence=ECO:0000250|UniProtKB:P09022 75..203 37/165 (22%)
COG5576 176..>286 CDD:227863 53/201 (26%)
Antp-type hexapeptide 204..209 2/50 (4%)
Homeodomain 233..286 CDD:459649 35/52 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..335 10/38 (26%)

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