DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and emx2

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571355.2 Gene:emx2 / 30537 ZFINID:ZDB-GENE-990415-54 Length:247 Species:Danio rerio


Alignment Length:157 Identity:49/157 - (31%)
Similarity:70/157 - (44%) Gaps:35/157 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 LGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGME---------------PKRQRTA 372
            |..|.|...|.|.........|||:  ||........:| |.|               |||.|||
Zfish    94 LSSSHSPHPLFASQQRDPSTFYPWL--IHRYRYLGHRFQ-GNETSPESFLLHNALARKPKRIRTA 155

  Fly   373 YTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKT 437
            ::..|:|.||..|..|.|:....|.::||:|.|:|.|:|:||||||.|:|            ::.
Zfish   156 FSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFK------------RQK 208

  Fly   438 VDANGNPTPVAKKPTK-----RAASKK 459
            ::..|:.:...||.|.     |.|:|:
Zfish   209 LEEEGSDSQQKKKGTHHINRWRLATKQ 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 27/55 (49%)
emx2NP_571355.2 Homeodomain 150..206 CDD:459649 28/67 (42%)

Return to query results.
Submit another query.