DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and ceh-62

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_496326.2 Gene:ceh-62 / 187642 WormBaseID:WBGene00011069 Length:278 Species:Caenorhabditis elegans


Alignment Length:167 Identity:49/167 - (29%)
Similarity:77/167 - (46%) Gaps:19/167 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 PGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
            |..:.:|:||.::..|...||.|:..:.|:.|.:|..:|.:|.|||.|:|.||||||.|.|:|.|
 Worm    92 PNEKSRRKRTTFSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVKTWFQNRRAKDKRDRK 156

  Fly   427 LPNTKN----------VRKKTVDANGNPTPVAK--KPTKRAASKKQQQAQQ------QQQSQQQQ 473
            ..|..|          .||.:.|:...||...:  .||:...:.....|..      ..:|..|:
 Worm   157 SENASNHTSNSRRSSPSRKSSSDSTPTPTQATQFDMPTQIQTASPPTTADSAIFPPTSPESIIQK 221

  Fly   474 TQQTPVMNECIRSDSLES-IGDVSSSLGNPPYIPAAP 509
            .:|.|........|.|:: :..:|||.....::|:.|
 Worm   222 IEQFPSNQILPNFDILQTYLQSLSSSQIPLQFVPSTP 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 24/55 (44%)
ceh-62NP_496326.2 Homeodomain 97..153 CDD:459649 24/55 (44%)

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