DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bcd and HB53

DIOPT Version :10

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_201471.1 Gene:HB53 / 836803 AraportID:AT5G66700 Length:228 Species:Arabidopsis thaliana


Alignment Length:60 Identity:21/60 - (35%)
Similarity:29/60 - (48%) Gaps:4/60 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 MRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHK 153
            |.|.|:    .|..|:..||..|.....|.:.|...::.:|.|...||.:||:|||.|.|
plant    69 MLRKRK----LTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWK 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeodomain 106..153 CDD:459649 16/46 (35%)
HB53NP_201471.1 Homeodomain 71..125 CDD:459649 20/58 (34%)

Return to query results.
Submit another query.