DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and meox2a

DIOPT Version :10

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_017206696.1 Gene:meox2a / 556898 ZFINID:ZDB-GENE-080613-1 Length:302 Species:Danio rerio


Alignment Length:73 Identity:32/73 - (43%)
Similarity:40/73 - (54%) Gaps:4/73 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SEELPD----SLVMRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWF 145
            |.|..|    |.|..:||:.||.||..||.|||..|....|||..|..:::..|.|...|||:||
Zfish   171 SSESQDGNYKSDVSSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWF 235

  Fly   146 KNRRRRHK 153
            :|||.:.|
Zfish   236 QNRRMKWK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeodomain 106..153 CDD:459649 20/46 (43%)
meox2aXP_017206696.1 Homeodomain 188..244 CDD:459649 26/56 (46%)

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