Protein Alignment bcd and Hoxd11

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_032299.1
• Gene: Hoxd11 / 15431
• MGIID: 96203
• Length: 336
• Species: Mus musculus
• Alignment Length: 188
• Identity: 49/188 - (26%)
• Similarity: 71/188 - (37%)
• Gaps: 54/188 - (28%)

  Fly     7 DQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFRNPFDLLFDERTGAINYNYIRP 71
            ||.:...|.|       |.:.|.|...|.|    ||    |:             ||.:....:|
Mouse   177 DQFYEAAPGP-------PFAGPQPQPAPAP----PQ----PE-------------GAADKGDPKP 213

  Fly    72 ------------YLPNQMPK-------------PDVFPSEELPDSLVMRRPRRTRTTFTSSQIAE 111
                        ..|...||             |....:|:...::..:|.|:.|..:|..||.|
Mouse   214 GAGGGGGSPCAKATPGPEPKGAAEGGGGEGEGPPGEAGAEKSGGTVAPQRSRKKRCPYTKYQIRE 278

  Fly   112 LEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPL 169
            ||:.|....|:...:...||..|.|...||||||:|||.:.| :.::.:.|.:.|.||
Mouse   279 LEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK-KLNRDRLQYFTGNPL 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	20/46 (43%)
Hoxd11	NP_032299.1	DUF3528	26..187	CDD:432284	4/16 (25%)
		Homeodomain	265..321	CDD:459649	24/56 (43%)