Protein Alignment bcd and Hoxa5

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_034583.1
• Gene: Hoxa5 / 15402
• MGIID: 96177
• Length: 270
• Species: Mus musculus
• Alignment Length: 196
• Identity: 51/196 - (26%)
• Similarity: 76/196 - (38%)
• Gaps: 58/196 - (29%)

  Fly     4 PPPDQNFYHHPLPHTHTHPHPHSHPHPH-----------SHPHPHHQH------------PQLQL 45
            ||||      |||.:...|.|.|..| |           :..:....|            .:...
Mouse    96 PPPD------PLPCSAVAPSPGSDSH-HGGKNSLGNSSGASANAGSTHISSREGVGTASAAEEDA 153

  Fly    46 PPQFRNPFDLLFDERTGAINYNYIRPYLPNQMP--KPDVFP-SEEL---PDSLVMRRPRRTRTTF 104
            |..         .|:.||.:.       |:..|  :|.::| ..:|   .|::.....:|.||.:
Mouse   154 PAS---------SEQAGAQSE-------PSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAY 202

  Fly   105 TSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPL 169
            |..|..|||:.|...||||..|..:::..|.|...|:||||:|||.:.|      ||...:.|.:
Mouse   203 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK------KDNKLKSMSM 261

  Fly   170 S 170
            :
Mouse   262 A 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	20/46 (43%)
Hoxa5	NP_034583.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	75..175		19/101 (19%)
		Antp-type hexapeptide	176..181		1/4 (25%)
		Homeodomain	196..252	CDD:459649	25/61 (41%)