DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and LOC1272724

DIOPT Version :10

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_311623.3 Gene:LOC1272724 / 1272724 VectorBaseID:AGAMI1_000064 Length:327 Species:Anopheles gambiae


Alignment Length:56 Identity:25/56 - (44%)
Similarity:33/56 - (58%) Gaps:0/56 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHK 153
            ||.|.|:|..|..|||:.|....|||..|..:::..|.|...|:||||:|||.:.|
Mosquito   237 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeodomain 106..153 CDD:459649 19/46 (41%)
LOC1272724XP_311623.3 None

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