Protein Alignment bcd and LOC1272715

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_061500303.1
• Gene: LOC1272715 / 1272715
• VectorBaseID: AGAMI1_000880
• Length: 433
• Species: Anopheles gambiae
• Alignment Length: 271
• Identity: 54/271 - (19%)
• Similarity: 89/271 - (32%)
• Gaps: 89/271 - (32%)

  Fly     5 PPDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFRNPFDLLFDERTGAINYNYI 69
            |.:.||..||.       :|...|..:...............|..::.::        :.|.:.:
Mosquito   238 PTEANFQPHPY-------YPKYEPDAYITASTERSRGVTGDQPSLQSSYE--------SYNSSGL 287

  Fly    70 RPYLPNQMPKP------------DVFPSE--ELPDSLVMRRPRRTRTTFTSSQIAELEQHFLQGR 120
            |.|.....|.|            ...||.  |...::.:|:.|:..:.|   |..|||:.||...
Mosquito   288 RSYSSETYPNPGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKPYSKF---QTLELEKEFLFNA 349

  Fly   121 YLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQT 185
            |::..:..:|:..|.|...||||||:|||.::|..|.:...|:..|..
Mosquito   350 YVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQSAQANSGSS----------------- 397

  Fly   186 LSLGGGATPNALTPSPTPSTPTAHMTEHYSESFNAYYNYNGGHNHAQANRHMHMQYPSGGGPGPG 250
                                                 |.:..|:|:||..|.:   |...|.|.|
Mosquito   398 -------------------------------------NNSSSHSHSQAQPHHN---PHHIGLGLG 422

  Fly   251 STNVNGGQFFQ 261
            .:.::|.:..|
Mosquito   423 MSTLHGSKMHQ 433

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	19/46 (41%)
LOC1272715	XP_061500303.1	None